I. Expression across cell types
Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| epithelial cell | 5 studies | 32% ± 8% | |
| ciliated cell | 3 studies | 20% ± 2% | |
| dendritic cell | 3 studies | 23% ± 4% | |
| intestinal crypt stem cell | 3 studies | 22% ± 1% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| epithelial cell | 5 studies | 32% ± 8% | |
| ciliated cell | 3 studies | 20% ± 2% | |
| dendritic cell | 3 studies | 23% ± 4% | |
| intestinal crypt stem cell | 3 studies | 22% ± 1% |
Insufficient scRNA-seq data for expression of TSFM at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 100% | 1211.56 | 2638 / 2642 | 64% | 1.66 | 454 / 705 |
| ovary | 100% | 837.54 | 180 / 180 | 17% | 0.22 | 71 / 430 |
| intestine | 100% | 1152.82 | 966 / 966 | 13% | 0.19 | 69 / 527 |
| stomach | 100% | 945.39 | 359 / 359 | 9% | 0.16 | 25 / 286 |
| bladder | 100% | 1081.10 | 21 / 21 | 9% | 0.13 | 43 / 504 |
| breast | 100% | 1107.76 | 459 / 459 | 8% | 0.12 | 94 / 1118 |
| esophagus | 100% | 1092.32 | 1445 / 1445 | 5% | 0.07 | 9 / 183 |
| lung | 98% | 862.13 | 569 / 578 | 6% | 0.11 | 74 / 1155 |
| skin | 100% | 1409.43 | 1809 / 1809 | 4% | 0.10 | 20 / 472 |
| kidney | 100% | 1520.12 | 89 / 89 | 4% | 0.07 | 38 / 901 |
| adrenal gland | 100% | 3430.03 | 258 / 258 | 4% | 0.05 | 9 / 230 |
| uterus | 100% | 997.62 | 170 / 170 | 4% | 0.05 | 17 / 459 |
| thymus | 100% | 1051.42 | 653 / 653 | 1% | 0.01 | 7 / 605 |
| pancreas | 99% | 631.87 | 326 / 328 | 2% | 0.03 | 3 / 178 |
| prostate | 100% | 991.42 | 245 / 245 | 1% | 0.01 | 3 / 502 |
| adipose | 100% | 1011.53 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| liver | 100% | 1416.23 | 226 / 226 | 0% | 0 | 0 / 406 |
| muscle | 100% | 1757.28 | 803 / 803 | 0% | 0 | 0 / 0 |
| spleen | 100% | 1038.64 | 241 / 241 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 878.30 | 1334 / 1335 | 0% | 0 | 0 / 0 |
| heart | 97% | 1194.97 | 837 / 861 | 0% | 0 | 0 / 0 |
| peripheral blood | 68% | 624.33 | 634 / 929 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 7% | 0.10 | 3 / 45 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0006414 | Biological process | translational elongation |
| GO_0032784 | Biological process | regulation of DNA-templated transcription elongation |
| GO_0070125 | Biological process | mitochondrial translational elongation |
| GO_0070129 | Biological process | regulation of mitochondrial translation |
| GO_0005739 | Cellular component | mitochondrion |
| GO_0005654 | Cellular component | nucleoplasm |
| GO_0003746 | Molecular function | translation elongation factor activity |
| GO_0005515 | Molecular function | protein binding |
| GO_0003723 | Molecular function | RNA binding |
| Gene name | TSFM |
| Protein name | Elongation factor Ts, mitochondrial (EF-Ts) (EF-TsMt) Ts translation elongation factor, mitochondrial |
| Synonyms | |
| Description | FUNCTION: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. . FUNCTION: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. . FUNCTION: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. . FUNCTION: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. . FUNCTION: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. . |
| Accessions | F8VPA7 ENST00000651066.1 ENST00000652027.2 [P43897-1] ENST00000457189.1 P43897 ENST00000543727.5 [P43897-4] F8WCK2 C9JG32 ENST00000651899.1 ENST00000540550.6 [P43897-3] C9JT21 ENST00000417094.5 ENST00000550559.5 B4DHY8 E5KS95 A0A494C1D5 ENST00000323833.12 [P43897-2] ENST00000434359.5 ENST00000548851.5 F8VS27 A0A494C1M9 |
