Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 3916.36 | 180 / 180 | 100% | 40.06 | 430 / 430 |
esophagus | 100% | 2808.97 | 1444 / 1445 | 100% | 49.10 | 183 / 183 |
lung | 100% | 3349.78 | 578 / 578 | 100% | 31.25 | 1153 / 1155 |
brain | 100% | 2984.27 | 2641 / 2642 | 100% | 33.81 | 704 / 705 |
breast | 100% | 3208.05 | 459 / 459 | 99% | 39.61 | 1110 / 1118 |
prostate | 100% | 3214.48 | 245 / 245 | 99% | 26.55 | 497 / 502 |
uterus | 100% | 4127.41 | 170 / 170 | 99% | 30.99 | 454 / 459 |
bladder | 100% | 3102.19 | 21 / 21 | 99% | 25.82 | 498 / 504 |
intestine | 100% | 3464.14 | 966 / 966 | 98% | 25.95 | 515 / 527 |
pancreas | 99% | 1618.98 | 326 / 328 | 98% | 23.72 | 175 / 178 |
stomach | 100% | 2272.49 | 359 / 359 | 98% | 30.92 | 279 / 286 |
thymus | 100% | 3101.73 | 653 / 653 | 97% | 19.38 | 587 / 605 |
skin | 99% | 2733.30 | 1795 / 1809 | 94% | 26.29 | 446 / 472 |
kidney | 100% | 2487.17 | 89 / 89 | 92% | 18.77 | 832 / 901 |
adrenal gland | 100% | 3182.91 | 258 / 258 | 91% | 20.36 | 209 / 230 |
liver | 100% | 1366.75 | 226 / 226 | 74% | 9.93 | 301 / 406 |
adipose | 100% | 3397.34 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3042.24 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 3354.11 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 31.66 | 45 / 45 |
heart | 99% | 1686.31 | 856 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 97% | 5602.59 | 900 / 929 | 0% | 0 | 0 / 0 |
muscle | 94% | 967.76 | 754 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 76% | 15.83 | 22 / 29 |
eye | 0% | 0 | 0 / 0 | 65% | 9.49 | 52 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_1902033 | Biological process | regulation of hematopoietic stem cell proliferation |
GO_0032722 | Biological process | positive regulation of chemokine production |
GO_0008285 | Biological process | negative regulation of cell population proliferation |
GO_1901532 | Biological process | regulation of hematopoietic progenitor cell differentiation |
GO_1901224 | Biological process | positive regulation of non-canonical NF-kappaB signal transduction |
GO_0045071 | Biological process | negative regulation of viral genome replication |
GO_0032874 | Biological process | positive regulation of stress-activated MAPK cascade |
GO_0033689 | Biological process | negative regulation of osteoblast proliferation |
GO_0006412 | Biological process | translation |
GO_0009615 | Biological process | response to virus |
GO_0051607 | Biological process | defense response to virus |
GO_0035455 | Biological process | response to interferon-alpha |
GO_0036492 | Biological process | eiF2alpha phosphorylation in response to endoplasmic reticulum stress |
GO_0043410 | Biological process | positive regulation of MAPK cascade |
GO_0051092 | Biological process | positive regulation of NF-kappaB transcription factor activity |
GO_0030968 | Biological process | endoplasmic reticulum unfolded protein response |
GO_0043066 | Biological process | negative regulation of apoptotic process |
GO_1900225 | Biological process | regulation of NLRP3 inflammasome complex assembly |
GO_1902036 | Biological process | regulation of hematopoietic stem cell differentiation |
GO_0034198 | Biological process | cellular response to amino acid starvation |
GO_0001819 | Biological process | positive regulation of cytokine production |
GO_0006468 | Biological process | protein phosphorylation |
GO_0046777 | Biological process | protein autophosphorylation |
GO_0017148 | Biological process | negative regulation of translation |
GO_0140374 | Biological process | antiviral innate immune response |
GO_0005840 | Cellular component | ribosome |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0016020 | Cellular component | membrane |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0004715 | Molecular function | non-membrane spanning protein tyrosine kinase activity |
GO_0106310 | Molecular function | protein serine kinase activity |
GO_0004694 | Molecular function | eukaryotic translation initiation factor 2alpha kinase activity |
GO_0004674 | Molecular function | protein serine/threonine kinase activity |
GO_0042802 | Molecular function | identical protein binding |
GO_0004672 | Molecular function | protein kinase activity |
GO_0005524 | Molecular function | ATP binding |
GO_0016301 | Molecular function | kinase activity |
GO_0003723 | Molecular function | RNA binding |
GO_0019888 | Molecular function | protein phosphatase regulator activity |
GO_0005515 | Molecular function | protein binding |
GO_0003725 | Molecular function | double-stranded RNA binding |
Gene name | EIF2AK2 |
Protein name | Eukaryotic translation initiation factor 2 alpha kinase 2 Interferon-induced, double-stranded RNA-activated protein kinase (EC 2.7.11.1) (Eukaryotic translation initiation factor 2-alpha kinase 2) (eIF-2A protein kinase 2) (Interferon-inducible RNA-dependent protein kinase) (P1/eIF-2A protein kinase) (Protein kinase RNA-activated) (PKR) (Protein kinase R) (Tyrosine-protein kinase EIF2AK2) (EC 2.7.10.2) (p68 kinase) eIF2AK2 protein |
Synonyms | PRKR PKR |
Description | FUNCTION: IFN-induced dsRNA-dependent serine/threonine-protein kinase that phosphorylates the alpha subunit of eukaryotic translation initiation factor 2 (EIF2S1/eIF-2-alpha) and plays a key role in the innate immune response to viral infection . Inhibits viral replication via the integrated stress response (ISR): EIF2S1/eIF-2-alpha phosphorylation in response to viral infection converts EIF2S1/eIF-2-alpha in a global protein synthesis inhibitor, resulting to a shutdown of cellular and viral protein synthesis, while concomitantly initiating the preferential translation of ISR-specific mRNAs, such as the transcriptional activator ATF4 . Exerts its antiviral activity on a wide range of DNA and RNA viruses including hepatitis C virus (HCV), hepatitis B virus (HBV), measles virus (MV) and herpes simplex virus 1 (HHV-1) . Also involved in the regulation of signal transduction, apoptosis, cell proliferation and differentiation: phosphorylates other substrates including p53/TP53, PPP2R5A, DHX9, ILF3, IRS1 and the HHV-1 viral protein US11 . In addition to serine/threonine-protein kinase activity, also has tyrosine-protein kinase activity and phosphorylates CDK1 at 'Tyr-4' upon DNA damage, facilitating its ubiquitination and proteasomal degradation . Either as an adapter protein and/or via its kinase activity, can regulate various signaling pathways (p38 MAP kinase, NF-kappa-B and insulin signaling pathways) and transcription factors (JUN, STAT1, STAT3, IRF1, ATF3) involved in the expression of genes encoding pro-inflammatory cytokines and IFNs . Activates the NF-kappa-B pathway via interaction with IKBKB and TRAF family of proteins and activates the p38 MAP kinase pathway via interaction with MAP2K6 . Can act as both a positive and negative regulator of the insulin signaling pathway (ISP) . Negatively regulates ISP by inducing the inhibitory phosphorylation of insulin receptor substrate 1 (IRS1) at 'Ser-312' and positively regulates ISP via phosphorylation of PPP2R5A which activates FOXO1, which in turn up-regulates the expression of insulin receptor substrate 2 (IRS2) . Can regulate NLRP3 inflammasome assembly and the activation of NLRP3, NLRP1, AIM2 and NLRC4 inflammasomes . Plays a role in the regulation of the cytoskeleton by binding to gelsolin (GSN), sequestering the protein in an inactive conformation away from actin (By similarity). . |
Accessions | Q8IW76 ENST00000395127.6 [P19525-1] ENST00000680273.1 A0A7P0Z4M0 ENST00000679507.1 [P19525-1] ENST00000233057.9 [P19525-1] ENST00000681463.1 [P19525-1] A0A7P0TBA9 Q05CP4 Q6PK38 ENST00000647926.1 [P19525-1] A0A7P0TAL9 ENST00000405334.5 [P19525-2] ENST00000681507.1 [P19525-1] P19525 ENST00000679979.1 ENST00000681516.1 B7ZKK7 |