Insufficient scRNA-seq data for expression of PTCD1 at single-cell level.
Insufficient scRNA-seq data for expression of PTCD1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 99% | 729.83 | 2622 / 2642 | 99% | 2.48 | 696 / 705 |
prostate | 100% | 1432.47 | 245 / 245 | 93% | 1.65 | 469 / 502 |
intestine | 100% | 1207.74 | 966 / 966 | 92% | 2.23 | 487 / 527 |
skin | 100% | 1165.45 | 1809 / 1809 | 92% | 1.83 | 436 / 472 |
ovary | 100% | 983.73 | 180 / 180 | 90% | 1.79 | 387 / 430 |
esophagus | 100% | 1157.18 | 1445 / 1445 | 90% | 2.20 | 164 / 183 |
bladder | 100% | 1282.95 | 21 / 21 | 89% | 1.86 | 449 / 504 |
uterus | 100% | 1183.91 | 170 / 170 | 88% | 1.65 | 405 / 459 |
stomach | 100% | 895.08 | 359 / 359 | 87% | 1.96 | 249 / 286 |
breast | 100% | 1100.97 | 459 / 459 | 84% | 1.56 | 942 / 1118 |
lung | 100% | 906.11 | 577 / 578 | 78% | 1.50 | 899 / 1155 |
pancreas | 100% | 548.49 | 327 / 328 | 76% | 1.21 | 135 / 178 |
thymus | 100% | 1085.97 | 653 / 653 | 65% | 1.00 | 394 / 605 |
kidney | 100% | 775.19 | 89 / 89 | 62% | 1.07 | 560 / 901 |
liver | 100% | 709.84 | 226 / 226 | 56% | 0.88 | 228 / 406 |
adrenal gland | 100% | 1056.21 | 258 / 258 | 54% | 0.72 | 124 / 230 |
adipose | 100% | 1037.78 | 1204 / 1204 | 0% | 0 | 0 / 0 |
muscle | 100% | 1452.92 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1391.28 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 1.46 | 1 / 1 |
blood vessel | 100% | 858.37 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 699.80 | 853 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 94% | 699.06 | 872 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 94% | 1.78 | 75 / 80 |
lymph node | 0% | 0 | 0 / 0 | 86% | 1.65 | 25 / 29 |
tonsil | 0% | 0 | 0 / 0 | 80% | 1.30 | 36 / 45 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0042780 | Biological process | tRNA 3'-end processing |
GO_0032543 | Biological process | mitochondrial translation |
GO_0005739 | Cellular component | mitochondrion |
GO_0005759 | Cellular component | mitochondrial matrix |
GO_0000049 | Molecular function | tRNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | PTCD1 |
Protein name | Pentatricopeptide repeat domain 1 Pentatricopeptide repeat-containing protein 1, mitochondrial PTCD1 protein |
Synonyms | hCG_2023422 tcag7.1151 KIAA0632 |
Description | FUNCTION: Mitochondrial protein implicated in negative regulation of leucine tRNA levels, as well as negative regulation of mitochondria-encoded proteins and COX activity. Affects also the 3'-processing of mitochondrial tRNAs. . |
Accessions | Q3SYP6 ENST00000419981.1 C9JGL8 ENST00000430029.1 ENST00000430982.1 A4D273 C9JWL7 Q3ZB84 C9JQN9 ENST00000292478.9 O75127 |