Name | Number of supported studies | Average coverage | |
---|---|---|---|
classical monocyte | 8 studies | 23% ± 3% | |
non-classical monocyte | 5 studies | 27% ± 3% | |
endothelial cell | 4 studies | 18% ± 2% | |
conventional dendritic cell | 3 studies | 19% ± 3% | |
epithelial cell | 3 studies | 24% ± 5% | |
ciliated cell | 3 studies | 17% ± 2% | |
glutamatergic neuron | 3 studies | 35% ± 11% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 3 studies | 21% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
pancreas | 100% | 2519.84 | 328 / 328 | 100% | 16.97 | 178 / 178 |
skin | 100% | 2913.94 | 1809 / 1809 | 100% | 26.01 | 472 / 472 |
stomach | 100% | 1487.58 | 359 / 359 | 100% | 20.58 | 286 / 286 |
esophagus | 100% | 1703.19 | 1444 / 1445 | 100% | 23.06 | 183 / 183 |
uterus | 100% | 2027.07 | 170 / 170 | 100% | 21.12 | 458 / 459 |
bladder | 100% | 1899.62 | 21 / 21 | 100% | 21.22 | 502 / 504 |
prostate | 100% | 2270.73 | 245 / 245 | 100% | 18.77 | 500 / 502 |
thymus | 100% | 1754.88 | 652 / 653 | 99% | 13.34 | 601 / 605 |
intestine | 100% | 1425.79 | 963 / 966 | 99% | 23.22 | 524 / 527 |
breast | 100% | 1770.86 | 457 / 459 | 99% | 22.41 | 1110 / 1118 |
lung | 99% | 2133.44 | 574 / 578 | 99% | 19.73 | 1148 / 1155 |
adrenal gland | 100% | 3013.95 | 258 / 258 | 98% | 22.71 | 225 / 230 |
ovary | 100% | 1789.03 | 180 / 180 | 97% | 14.23 | 417 / 430 |
brain | 96% | 1651.92 | 2529 / 2642 | 99% | 14.29 | 700 / 705 |
kidney | 100% | 1474.83 | 89 / 89 | 93% | 10.80 | 839 / 901 |
liver | 83% | 1137.28 | 188 / 226 | 93% | 11.59 | 378 / 406 |
eye | 0% | 0 | 0 / 0 | 100% | 20.78 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 28.83 | 29 / 29 |
muscle | 100% | 5517.17 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2631.49 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 17.87 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 15.51 | 1 / 1 |
adipose | 100% | 1724.23 | 1198 / 1204 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 3922.28 | 923 / 929 | 0% | 0 | 0 / 0 |
blood vessel | 96% | 1114.28 | 1288 / 1335 | 0% | 0 | 0 / 0 |
heart | 95% | 2162.98 | 814 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006364 | Biological process | rRNA processing |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0005730 | Cellular component | nucleolus |
GO_0005829 | Cellular component | cytosol |
GO_0031965 | Cellular component | nuclear membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0003723 | Molecular function | RNA binding |
Gene name | RRP12 |
Protein name | Ribosomal RNA processing 12 homolog RRP12-like protein |
Synonyms | KIAA0690 |
Description | |
Accessions | ENST00000414986.5 [Q5JTH9-3] A0A087X1U8 ENST00000536831.5 [Q5JTH9-1] A0A087WYW2 ENST00000487612.1 H7C1M8 A0A087X0G0 ENST00000439965.6 ENST00000370992.9 [Q5JTH9-1] ENST00000618765.1 Q5JTH9 ENST00000315563.10 [Q5JTH9-2] ENST00000622320.4 |