Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 15 studies | 43% ± 16% | |
oligodendrocyte precursor cell | 14 studies | 71% ± 20% | |
GABAergic neuron | 11 studies | 58% ± 22% | |
endothelial cell | 6 studies | 31% ± 15% | |
interneuron | 6 studies | 63% ± 23% | |
astrocyte | 5 studies | 35% ± 23% | |
glutamatergic neuron | 4 studies | 30% ± 10% | |
microglial cell | 4 studies | 34% ± 19% | |
pericyte | 4 studies | 39% ± 19% | |
differentiation-committed oligodendrocyte precursor | 3 studies | 55% ± 9% | |
GABAergic interneuron | 3 studies | 70% ± 18% | |
neuron | 3 studies | 34% ± 5% | |
Mueller cell | 3 studies | 17% ± 1% | |
GABAergic amacrine cell | 3 studies | 44% ± 7% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 16 studies | 29% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 2906.89 | 2641 / 2642 | 81% | 9.05 | 570 / 705 |
eye | 0% | 0 | 0 / 0 | 79% | 4.69 | 63 / 80 |
lung | 62% | 257.33 | 360 / 578 | 12% | 0.36 | 138 / 1155 |
prostate | 25% | 79.51 | 61 / 245 | 46% | 1.84 | 233 / 502 |
pancreas | 50% | 176.58 | 163 / 328 | 15% | 0.39 | 26 / 178 |
intestine | 57% | 305.34 | 553 / 966 | 2% | 0.03 | 8 / 527 |
tonsil | 0% | 0 | 0 / 0 | 53% | 2.53 | 24 / 45 |
esophagus | 40% | 162.16 | 584 / 1445 | 13% | 0.58 | 23 / 183 |
peripheral blood | 27% | 145.45 | 254 / 929 | 0% | 0 | 0 / 0 |
stomach | 24% | 90.54 | 85 / 359 | 1% | 0.06 | 4 / 286 |
uterus | 9% | 34.58 | 16 / 170 | 12% | 0.48 | 56 / 459 |
thymus | 1% | 3.15 | 6 / 653 | 16% | 1.07 | 99 / 605 |
bladder | 14% | 51.95 | 3 / 21 | 1% | 0.05 | 6 / 504 |
breast | 9% | 35.54 | 41 / 459 | 6% | 0.20 | 66 / 1118 |
ovary | 1% | 2.46 | 2 / 180 | 14% | 0.44 | 59 / 430 |
adrenal gland | 3% | 10.53 | 8 / 258 | 10% | 0.30 | 22 / 230 |
kidney | 8% | 20.36 | 7 / 89 | 3% | 0.22 | 28 / 901 |
skin | 3% | 6.62 | 46 / 1809 | 7% | 0.25 | 32 / 472 |
spleen | 6% | 15.20 | 14 / 241 | 0% | 0 | 0 / 0 |
liver | 0% | 0 | 0 / 226 | 5% | 0.19 | 20 / 406 |
heart | 4% | 10.08 | 33 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.05 | 1 / 29 |
adipose | 2% | 5.87 | 26 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 1% | 4.13 | 17 / 1335 | 0% | 0 | 0 / 0 |
muscle | 0% | 1.82 | 4 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006382 | Biological process | adenosine to inosine editing |
GO_0006397 | Biological process | mRNA processing |
GO_0006396 | Biological process | RNA processing |
GO_0005730 | Cellular component | nucleolus |
GO_0005737 | Cellular component | cytoplasm |
GO_0008251 | Molecular function | tRNA-specific adenosine deaminase activity |
GO_0003726 | Molecular function | double-stranded RNA adenosine deaminase activity |
GO_0003727 | Molecular function | single-stranded RNA binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0003725 | Molecular function | double-stranded RNA binding |
GO_0003723 | Molecular function | RNA binding |
GO_0004000 | Molecular function | adenosine deaminase activity |
Gene name | ADARB2 |
Protein name | Double-stranded RNA-specific editase B2 (EC 3.5.-.-) (RNA-dependent adenosine deaminase 3) (RNA-editing deaminase 2) (RNA-editing enzyme 2) (dsRNA adenosine deaminase B2) ADARB2 protein Adenosine deaminase RNA specific B2 (inactive) |
Synonyms | ADAR3 RED2 |
Description | FUNCTION: Lacks editing activity. It prevents the binding of other ADAR enzymes to targets in vitro, and decreases the efficiency of these enzymes. Capable of binding to dsRNA but also to ssRNA. |
Accessions | A4VCH5 ENST00000381312.6 [Q9NS39-1] Q5VW43 Q9NS39 ENST00000381310.7 [Q9NS39-2] ENST00000381305.1 Q86X17 |