Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 4 studies | 18% ± 3% | |
epithelial cell | 4 studies | 31% ± 6% | |
classical monocyte | 3 studies | 22% ± 3% | |
endothelial cell | 3 studies | 25% ± 4% | |
natural killer cell | 3 studies | 16% ± 1% | |
oligodendrocyte | 3 studies | 21% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 5931.38 | 1445 / 1445 | 100% | 74.47 | 183 / 183 |
prostate | 100% | 7193.42 | 245 / 245 | 100% | 108.93 | 502 / 502 |
lung | 100% | 6206.99 | 578 / 578 | 100% | 84.16 | 1154 / 1155 |
brain | 100% | 4446.90 | 2639 / 2642 | 100% | 140.73 | 705 / 705 |
skin | 100% | 5909.33 | 1809 / 1809 | 100% | 134.43 | 471 / 472 |
breast | 100% | 5195.95 | 459 / 459 | 100% | 100.56 | 1115 / 1118 |
pancreas | 100% | 3189.11 | 327 / 328 | 100% | 76.48 | 178 / 178 |
stomach | 100% | 5485.84 | 359 / 359 | 100% | 69.79 | 285 / 286 |
uterus | 100% | 7952.09 | 170 / 170 | 100% | 88.17 | 457 / 459 |
thymus | 100% | 6637.94 | 653 / 653 | 99% | 109.70 | 601 / 605 |
ovary | 100% | 11496.22 | 180 / 180 | 99% | 57.04 | 427 / 430 |
intestine | 100% | 5808.92 | 966 / 966 | 99% | 73.85 | 523 / 527 |
kidney | 100% | 5459.04 | 89 / 89 | 99% | 74.48 | 892 / 901 |
bladder | 100% | 5869.19 | 21 / 21 | 99% | 69.58 | 498 / 504 |
liver | 100% | 2738.73 | 226 / 226 | 96% | 46.67 | 391 / 406 |
adrenal gland | 100% | 5585.34 | 258 / 258 | 93% | 53.50 | 213 / 230 |
adipose | 100% | 4377.93 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 4934.93 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 118.89 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 95.74 | 29 / 29 |
spleen | 100% | 6331.19 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 108.45 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 33.80 | 1 / 1 |
muscle | 100% | 3496.59 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 100% | 3324.71 | 857 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 4484.33 | 912 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0045727 | Biological process | positive regulation of translation |
GO_0016973 | Biological process | poly(A)+ mRNA export from nucleus |
GO_0016607 | Cellular component | nuclear speck |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0036464 | Cellular component | cytoplasmic ribonucleoprotein granule |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0044877 | Molecular function | protein-containing complex binding |
GO_0005515 | Molecular function | protein binding |
GO_0003729 | Molecular function | mRNA binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | POLDIP3 |
Protein name | Polymerase delta-interacting protein 3 (46 kDa DNA polymerase delta interaction protein) (p46) (S6K1 Aly/REF-like target) (SKAR) DNA polymerase delta interacting protein 3 (Polymerase delta interacting protein 46) POLDIP3 protein DNA polymerase delta interacting protein 3 |
Synonyms | KIAA1649 PDIP46 |
Description | FUNCTION: Is involved in regulation of translation. Is preferentially associated with CBC-bound spliced mRNA-protein complexes during the pioneer round of mRNA translation. Contributes to enhanced translational efficiency of spliced over nonspliced mRNAs. Recruits activated ribosomal protein S6 kinase beta-1 I/RPS6KB1 to newly synthesized mRNA. Involved in nuclear mRNA export; probably mediated by association with the TREX complex. . |
Accessions | F6VRR5 Q96DI9 Q6R954 Q8WUT1 Q9BY77 ENST00000252115.10 [Q9BY77-1] F8WCX5 ENST00000348657.6 [Q9BY77-2] ENST00000339677.10 ENST00000451060.6 ENST00000445215.5 |