FUBP1 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
endothelial cell	24 studies	27% ± 12%	Explore
natural killer cell	22 studies	22% ± 5%	Explore
CD8-positive, alpha-beta T cell	17 studies	21% ± 4%	Explore
B cell	16 studies	24% ± 7%	Explore
fibroblast	16 studies	24% ± 9%	Explore
regulatory T cell	15 studies	20% ± 4%	Explore
CD16-negative, CD56-bright natural killer cell, human	13 studies	20% ± 4%	Explore
T cell	12 studies	23% ± 6%	Explore
oligodendrocyte precursor cell	12 studies	30% ± 13%	Explore
astrocyte	11 studies	28% ± 12%	Explore
oligodendrocyte	11 studies	29% ± 11%	Explore
naive B cell	10 studies	19% ± 3%	Explore
CD4-positive, alpha-beta T cell	10 studies	23% ± 5%	Explore
CD16-positive, CD56-dim natural killer cell, human	9 studies	22% ± 5%	Explore
microglial cell	9 studies	29% ± 10%	Explore
pericyte	9 studies	22% ± 8%	Explore
CD8-positive, alpha-beta memory T cell	9 studies	23% ± 3%	Explore
basal cell	9 studies	28% ± 13%	Explore
gamma-delta T cell	9 studies	24% ± 12%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	8 studies	18% ± 3%	Explore
effector memory CD8-positive, alpha-beta T cell	8 studies	21% ± 6%	Explore
macrophage	8 studies	31% ± 10%	Explore
epithelial cell	8 studies	38% ± 21%	Explore
ciliated cell	8 studies	27% ± 8%	Explore
endothelial cell of lymphatic vessel	7 studies	25% ± 10%	Explore
neuron	7 studies	34% ± 15%	Explore
interneuron	7 studies	38% ± 19%	Explore
mucosal invariant T cell	7 studies	20% ± 3%	Explore
dendritic cell	7 studies	27% ± 14%	Explore
memory B cell	7 studies	19% ± 3%	Explore
GABAergic neuron	7 studies	38% ± 18%	Explore
smooth muscle cell	7 studies	21% ± 3%	Explore
mast cell	6 studies	23% ± 5%	Explore
hematopoietic precursor cell	6 studies	27% ± 12%	Explore
mature NK T cell	6 studies	20% ± 4%	Explore
leukocyte	5 studies	25% ± 6%	Explore
myofibroblast cell	5 studies	24% ± 7%	Explore
lymphocyte	5 studies	31% ± 11%	Explore
pro-B cell	5 studies	28% ± 7%	Explore
adipocyte	5 studies	24% ± 4%	Explore
glutamatergic neuron	5 studies	52% ± 18%	Explore
monocyte	5 studies	20% ± 4%	Explore
club cell	5 studies	25% ± 9%	Explore
plasmacytoid dendritic cell	5 studies	22% ± 9%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	4 studies	22% ± 5%	Explore
non-classical monocyte	4 studies	25% ± 9%	Explore
connective tissue cell	4 studies	24% ± 4%	Explore
abnormal cell	4 studies	26% ± 12%	Explore
myeloid cell	4 studies	24% ± 5%	Explore
precursor B cell	4 studies	29% ± 12%	Explore
vein endothelial cell	4 studies	32% ± 17%	Explore
endothelial cell of vascular tree	4 studies	27% ± 16%	Explore
innate lymphoid cell	4 studies	19% ± 2%	Explore
CD4-positive, alpha-beta memory T cell	4 studies	21% ± 5%	Explore
type I pneumocyte	4 studies	24% ± 6%	Explore
type II pneumocyte	4 studies	22% ± 5%	Explore
goblet cell	4 studies	33% ± 16%	Explore
classical monocyte	3 studies	29% ± 7%	Explore
effector CD8-positive, alpha-beta T cell	3 studies	21% ± 2%	Explore
conventional dendritic cell	3 studies	32% ± 14%	Explore
exhausted T cell	3 studies	22% ± 9%	Explore
plasmablast	3 studies	38% ± 15%	Explore
progenitor cell	3 studies	26% ± 4%	Explore
neural crest cell	3 studies	25% ± 3%	Explore
plasma cell	3 studies	34% ± 11%	Explore
retinal cone cell	3 studies	28% ± 4%	Explore
retinal rod cell	3 studies	21% ± 4%	Explore
Mueller cell	3 studies	22% ± 7%	Explore
rod bipolar cell	3 studies	27% ± 9%	Explore
CD4-positive helper T cell	3 studies	23% ± 2%	Explore
chondrocyte	3 studies	23% ± 3%	Explore
respiratory goblet cell	3 studies	25% ± 7%	Explore
neural progenitor cell	3 studies	33% ± 11%	Explore
granulocyte monocyte progenitor cell	3 studies	23% ± 5%	Explore
megakaryocyte-erythroid progenitor cell	3 studies	31% ± 16%	Explore
enteroendocrine cell	3 studies	23% ± 9%	Explore
intestinal crypt stem cell	3 studies	20% ± 3%	Explore
group 3 innate lymphoid cell	3 studies	26% ± 11%	Explore
transit amplifying cell	3 studies	37% ± 24%	Explore
double negative thymocyte	3 studies	30% ± 15%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	3 studies	19% ± 2%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
brain	12 studies	34% ± 17%	Explore
lung	8 studies	22% ± 6%	Explore
peripheral blood	8 studies	24% ± 10%	Explore
eye	5 studies	27% ± 12%	Explore
bone marrow	3 studies	21% ± 3%	Explore
intestine	3 studies	23% ± 9%	Explore
adipose	3 studies	20% ± 4%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	5186.40	1445 / 1445	100%	51.42	183 / 183
ovary	100%	10331.24	180 / 180	100%	44.48	430 / 430
lung	100%	7219.77	578 / 578	100%	47.42	1154 / 1155
breast	100%	6942.15	459 / 459	100%	59.01	1116 / 1118
intestine	100%	6077.94	966 / 966	100%	42.81	526 / 527
uterus	100%	8228.93	170 / 170	100%	53.30	458 / 459
stomach	100%	4389.19	359 / 359	100%	42.86	285 / 286
prostate	100%	5984.86	245 / 245	100%	46.04	500 / 502
thymus	100%	9418.05	653 / 653	100%	54.82	602 / 605
bladder	100%	5753.86	21 / 21	99%	42.92	500 / 504
pancreas	100%	3941.96	327 / 328	99%	40.50	176 / 178
kidney	100%	4874.04	89 / 89	98%	36.93	885 / 901
skin	100%	5965.65	1809 / 1809	97%	41.72	457 / 472
brain	97%	3601.69	2552 / 2642	99%	39.51	701 / 705
adrenal gland	100%	6714.18	258 / 258	94%	27.76	217 / 230
liver	94%	1819.23	213 / 226	83%	18.35	337 / 406
adipose	100%	6057.64	1204 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	52.52	29 / 29
muscle	100%	3959.23	803 / 803	0%	0	0 / 0
spleen	100%	6263.97	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	45.73	45 / 45
ureter	0%	0	0 / 0	100%	15.09	1 / 1
blood vessel	100%	5944.20	1334 / 1335	0%	0	0 / 0
heart	97%	3810.26	834 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	91%	22.73	73 / 80
peripheral blood	73%	4098.04	678 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

III. Associated gene sets

GO_0010628	Biological process	positive regulation of gene expression
GO_0010468	Biological process	regulation of gene expression
GO_0006357	Biological process	regulation of transcription by RNA polymerase II
GO_0005654	Cellular component	nucleoplasm
GO_0005737	Cellular component	cytoplasm
GO_0005634	Cellular component	nucleus
GO_0003723	Molecular function	RNA binding
GO_0005515	Molecular function	protein binding
GO_0003697	Molecular function	single-stranded DNA binding
GO_0003729	Molecular function	mRNA binding

IV. Literature review

[source]

Gene name	FUBP1
Protein name	Far upstream element binding protein 1 FUBP1 protein FUBP1 Far upstream element-binding protein 1 (FBP) (FUSE-binding protein 1) (DNA helicase V) (hDH V)
Synonyms
Description	FUNCTION: Regulates MYC expression by binding to a single-stranded far-upstream element (FUSE) upstream of the MYC promoter. May act both as activator and repressor of transcription. .
Accessions	A0A994J6G7 A0A994J3Q8 ENST00000421641.2 C9JSZ1 ENST00000703600.1 ENST00000370767.5 Q96AE4 E9PEB5 ENST00000294623.8 [Q96AE4-2] Q6PJY1 A0A1Z1G4M2 ENST00000703586.1 ENST00000370768.7 [Q96AE4-1]

FUBP1 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review