Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 5 studies | 20% ± 5% | |
epithelial cell | 5 studies | 22% ± 6% | |
macrophage | 5 studies | 23% ± 7% | |
GABAergic neuron | 3 studies | 35% ± 6% | |
glutamatergic neuron | 3 studies | 51% ± 4% | |
oligodendrocyte | 3 studies | 18% ± 1% | |
oligodendrocyte precursor cell | 3 studies | 23% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1805.54 | 1445 / 1445 | 100% | 26.56 | 183 / 183 |
lung | 100% | 1787.61 | 578 / 578 | 100% | 16.89 | 1154 / 1155 |
breast | 100% | 2132.67 | 459 / 459 | 100% | 18.60 | 1115 / 1118 |
ovary | 100% | 2355.46 | 180 / 180 | 100% | 11.18 | 428 / 430 |
bladder | 100% | 1905.76 | 21 / 21 | 99% | 16.00 | 501 / 504 |
prostate | 100% | 1899.14 | 245 / 245 | 99% | 13.96 | 498 / 502 |
uterus | 100% | 2245.48 | 170 / 170 | 99% | 17.31 | 455 / 459 |
kidney | 100% | 1209.02 | 89 / 89 | 99% | 15.63 | 893 / 901 |
thymus | 100% | 1923.17 | 653 / 653 | 99% | 14.31 | 599 / 605 |
stomach | 100% | 1387.77 | 359 / 359 | 98% | 19.58 | 281 / 286 |
pancreas | 100% | 1146.20 | 327 / 328 | 98% | 13.74 | 175 / 178 |
adrenal gland | 100% | 1587.85 | 258 / 258 | 98% | 11.45 | 225 / 230 |
intestine | 100% | 1700.71 | 966 / 966 | 98% | 18.31 | 515 / 527 |
brain | 98% | 964.44 | 2580 / 2642 | 100% | 13.14 | 705 / 705 |
liver | 100% | 1685.12 | 226 / 226 | 97% | 9.68 | 395 / 406 |
skin | 100% | 2775.62 | 1809 / 1809 | 96% | 18.50 | 453 / 472 |
adipose | 100% | 2301.62 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 20.34 | 29 / 29 |
muscle | 100% | 1424.22 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2277.49 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 19.49 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.15 | 1 / 1 |
blood vessel | 100% | 1354.96 | 1333 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 976.31 | 847 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 91% | 12.25 | 73 / 80 |
peripheral blood | 65% | 1466.20 | 605 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007601 | Biological process | visual perception |
GO_0006364 | Biological process | rRNA processing |
GO_0008150 | Biological process | biological_process |
GO_0042274 | Biological process | ribosomal small subunit biogenesis |
GO_0034388 | Cellular component | Pwp2p-containing subcomplex of 90S preribosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_0032040 | Cellular component | small-subunit processome |
GO_0003723 | Molecular function | RNA binding |
Gene name | WDR36 |
Protein name | WD repeat-containing protein 36 (T-cell activation WD repeat-containing protein) (TA-WDRP) WD repeat domain 36 |
Synonyms | |
Description | FUNCTION: Part of the small subunit (SSU) processome, first precursor of the small eukaryotic ribosomal subunit. During the assembly of the SSU processome in the nucleolus, many ribosome biogenesis factors, an RNA chaperone and ribosomal proteins associate with the nascent pre-rRNA and work in concert to generate RNA folding, modifications, rearrangements and cleavage as well as targeted degradation of pre-ribosomal RNA by the RNA exosome. Involved in the nucleolar processing of SSU 18S rRNA . Involved in T-cell activation and highly coregulated with IL2 . . |
Accessions | ENST00000513710.4 Q8NI36 A0A0A0MTB8 |