Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 3 studies | 24% ± 8% | |
glutamatergic neuron | 3 studies | 24% ± 9% | |
abnormal cell | 3 studies | 19% ± 2% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 3 studies | 24% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3334.28 | 1445 / 1445 | 100% | 36.02 | 183 / 183 |
liver | 100% | 3379.83 | 226 / 226 | 100% | 43.79 | 406 / 406 |
pancreas | 100% | 1752.67 | 328 / 328 | 100% | 41.28 | 178 / 178 |
stomach | 100% | 2514.45 | 359 / 359 | 100% | 43.01 | 286 / 286 |
thymus | 100% | 3088.60 | 653 / 653 | 100% | 55.83 | 605 / 605 |
uterus | 100% | 3102.52 | 170 / 170 | 100% | 50.90 | 459 / 459 |
skin | 100% | 2722.19 | 1808 / 1809 | 100% | 68.18 | 472 / 472 |
brain | 100% | 1966.42 | 2637 / 2642 | 100% | 46.21 | 705 / 705 |
kidney | 100% | 3819.27 | 89 / 89 | 100% | 52.06 | 899 / 901 |
ovary | 100% | 3057.32 | 180 / 180 | 100% | 32.76 | 429 / 430 |
intestine | 100% | 3296.10 | 966 / 966 | 100% | 50.30 | 525 / 527 |
prostate | 100% | 3545.98 | 245 / 245 | 100% | 54.97 | 500 / 502 |
lung | 100% | 2361.06 | 576 / 578 | 100% | 46.85 | 1154 / 1155 |
adrenal gland | 100% | 4779.96 | 258 / 258 | 100% | 43.52 | 229 / 230 |
bladder | 100% | 3528.86 | 21 / 21 | 99% | 51.07 | 501 / 504 |
breast | 100% | 2897.20 | 459 / 459 | 99% | 47.09 | 1111 / 1118 |
adipose | 100% | 3012.08 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 53.97 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 67.08 | 29 / 29 |
muscle | 100% | 6361.52 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2743.51 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 47.40 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 33.28 | 1 / 1 |
blood vessel | 100% | 3299.40 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 3128.11 | 856 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 76% | 1682.38 | 710 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0070131 | Biological process | positive regulation of mitochondrial translation |
GO_0008053 | Biological process | mitochondrial fusion |
GO_0031966 | Cellular component | mitochondrial membrane |
GO_0005743 | Cellular component | mitochondrial inner membrane |
GO_0005525 | Molecular function | GTP binding |
GO_0005085 | Molecular function | guanyl-nucleotide exchange factor activity |
GO_0019843 | Molecular function | rRNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | RCC1L |
Protein name | RCC1-like G exchanging factor-like protein (RCC1-like) (Williams-Beuren syndrome chromosomal region 16 protein) RCC1 like |
Synonyms | WBSCR16 |
Description | FUNCTION: Guanine nucleotide exchange factor (GEF) for mitochondrial dynamin-related GTPase OPA1. Activates OPA1, by exchanging bound GDP for free GTP, and drives OPA1 and MFN1-dependent mitochondrial fusion . Plays an essential role in mitochondrial ribosome biogenesis. As a component of a functional protein-RNA module, consisting of RCC1L, NGRN, RPUSD3, RPUSD4, TRUB2, FASTKD2 and 16S mitochondrial ribosomal RNA (16S mt-rRNA), controls 16S mt-rRNA abundance and is required for intra-mitochondrial translation of core subunits of the oxidative phosphorylation system . . |
Accessions | ENST00000614461.4 [Q96I51-3] Q96I51 A0A087WT38 ENST00000618035.4 [Q96I51-2] ENST00000610322.5 [Q96I51-1] ENST00000615250.1 |