Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 21 studies | 78% ± 14% | |
lung | 19 studies | 67% ± 17% | |
brain | 18 studies | 32% ± 12% | |
intestine | 13 studies | 66% ± 26% | |
kidney | 9 studies | 64% ± 22% | |
eye | 9 studies | 50% ± 23% | |
liver | 8 studies | 52% ± 24% | |
bone marrow | 6 studies | 66% ± 21% | |
lymph node | 6 studies | 88% ± 4% | |
pancreas | 5 studies | 74% ± 24% | |
placenta | 5 studies | 67% ± 29% | |
uterus | 5 studies | 76% ± 18% | |
adipose | 4 studies | 43% ± 25% | |
breast | 4 studies | 82% ± 9% | |
prostate | 4 studies | 72% ± 23% | |
heart | 3 studies | 33% ± 17% | |
adrenal gland | 3 studies | 67% ± 22% | |
esophagus | 3 studies | 72% ± 19% | |
skin | 3 studies | 65% ± 25% | |
thymus | 3 studies | 74% ± 34% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 130404.07 | 1445 / 1445 | 100% | 1869.99 | 183 / 183 |
pancreas | 100% | 187967.64 | 328 / 328 | 100% | 1702.90 | 178 / 178 |
thymus | 100% | 107104.99 | 653 / 653 | 100% | 2661.75 | 605 / 605 |
prostate | 100% | 103310.38 | 245 / 245 | 100% | 3996.97 | 501 / 502 |
intestine | 100% | 126593.46 | 966 / 966 | 100% | 2743.11 | 525 / 527 |
skin | 100% | 163936.36 | 1809 / 1809 | 99% | 2874.32 | 469 / 472 |
stomach | 100% | 115715.52 | 359 / 359 | 99% | 2340.31 | 284 / 286 |
breast | 100% | 131228.42 | 459 / 459 | 99% | 2148.69 | 1110 / 1118 |
kidney | 100% | 81481.45 | 89 / 89 | 99% | 2004.68 | 894 / 901 |
ovary | 100% | 206595.97 | 180 / 180 | 99% | 1520.65 | 426 / 430 |
uterus | 100% | 128466.36 | 170 / 170 | 99% | 1659.67 | 454 / 459 |
lung | 100% | 90819.93 | 577 / 578 | 99% | 1693.25 | 1143 / 1155 |
bladder | 100% | 120394.86 | 21 / 21 | 98% | 1844.62 | 496 / 504 |
brain | 98% | 66041.42 | 2593 / 2642 | 100% | 2135.73 | 704 / 705 |
adrenal gland | 100% | 115596.91 | 258 / 258 | 97% | 1611.55 | 223 / 230 |
liver | 99% | 56543.58 | 223 / 226 | 97% | 1220.11 | 392 / 406 |
adipose | 100% | 130463.46 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 5995.18 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 2616.20 | 29 / 29 |
muscle | 100% | 195636.80 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 81460.37 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 1996.78 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 976.01 | 1 / 1 |
blood vessel | 100% | 101134.66 | 1334 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 97417.66 | 906 / 929 | 0% | 0 | 0 / 0 |
heart | 97% | 91631.78 | 831 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0002244 | Biological process | hematopoietic progenitor cell differentiation |
GO_0006414 | Biological process | translational elongation |
GO_0045727 | Biological process | positive regulation of translation |
GO_0005576 | Cellular component | extracellular region |
GO_0005886 | Cellular component | plasma membrane |
GO_0005840 | Cellular component | ribosome |
GO_0016020 | Cellular component | membrane |
GO_0070062 | Cellular component | extracellular exosome |
GO_0034774 | Cellular component | secretory granule lumen |
GO_1904813 | Cellular component | ficolin-1-rich granule lumen |
GO_0005829 | Cellular component | cytosol |
GO_0045202 | Cellular component | synapse |
GO_0005737 | Cellular component | cytoplasm |
GO_1990904 | Cellular component | ribonucleoprotein complex |
GO_0016235 | Cellular component | aggresome |
GO_0005634 | Cellular component | nucleus |
GO_0043022 | Molecular function | ribosome binding |
GO_0045296 | Molecular function | cadherin binding |
GO_0019901 | Molecular function | protein kinase binding |
GO_0005525 | Molecular function | GTP binding |
GO_0003723 | Molecular function | RNA binding |
GO_0003746 | Molecular function | translation elongation factor activity |
GO_0005515 | Molecular function | protein binding |
GO_0003924 | Molecular function | GTPase activity |
Gene name | EEF2 |
Protein name | Eukaryotic translation elongation factor 2 EEF2 protein Elongation factor 2 (EF-2) (EC 3.6.5.-) |
Synonyms | EF2 |
Description | FUNCTION: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation . During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively . Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome . . |
Accessions | P13639 Q6PK56 ENST00000309311.7 ENST00000600794.1 M0R0I6 |