Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 6 studies | 22% ± 5% | |
epithelial cell | 5 studies | 30% ± 8% | |
oligodendrocyte | 5 studies | 21% ± 5% | |
astrocyte | 4 studies | 28% ± 6% | |
glutamatergic neuron | 4 studies | 40% ± 13% | |
oligodendrocyte precursor cell | 4 studies | 22% ± 6% | |
macrophage | 4 studies | 19% ± 2% | |
ciliated cell | 3 studies | 19% ± 1% | |
GABAergic neuron | 3 studies | 39% ± 3% | |
dendritic cell | 3 studies | 20% ± 2% | |
goblet cell | 3 studies | 32% ± 16% | |
interneuron | 3 studies | 38% ± 17% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2579.31 | 1445 / 1445 | 100% | 28.99 | 183 / 183 |
lung | 100% | 2726.43 | 578 / 578 | 100% | 25.61 | 1155 / 1155 |
ovary | 100% | 2685.10 | 180 / 180 | 100% | 17.30 | 430 / 430 |
prostate | 100% | 3034.48 | 245 / 245 | 100% | 34.83 | 502 / 502 |
breast | 100% | 2987.32 | 459 / 459 | 100% | 37.62 | 1117 / 1118 |
intestine | 100% | 2928.57 | 966 / 966 | 100% | 24.92 | 526 / 527 |
stomach | 100% | 3162.33 | 359 / 359 | 100% | 26.96 | 285 / 286 |
bladder | 100% | 2925.71 | 21 / 21 | 99% | 20.64 | 501 / 504 |
thymus | 100% | 2944.33 | 653 / 653 | 99% | 21.34 | 600 / 605 |
pancreas | 100% | 1704.84 | 327 / 328 | 99% | 22.47 | 177 / 178 |
kidney | 100% | 1982.40 | 89 / 89 | 99% | 18.68 | 888 / 901 |
uterus | 100% | 2921.29 | 170 / 170 | 98% | 19.35 | 451 / 459 |
skin | 100% | 3516.01 | 1809 / 1809 | 97% | 20.84 | 459 / 472 |
brain | 97% | 1336.30 | 2564 / 2642 | 100% | 13.27 | 704 / 705 |
adrenal gland | 100% | 2977.44 | 258 / 258 | 96% | 14.70 | 220 / 230 |
liver | 100% | 1774.61 | 226 / 226 | 95% | 12.12 | 384 / 406 |
adipose | 100% | 2899.59 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2510.39 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 23.54 | 29 / 29 |
muscle | 100% | 1831.95 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2672.44 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.54 | 1 / 1 |
tonsil | 0% | 0 | 0 / 0 | 98% | 17.24 | 44 / 45 |
heart | 97% | 1535.22 | 839 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 88% | 10.78 | 70 / 80 |
peripheral blood | 81% | 1625.03 | 754 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007030 | Biological process | Golgi organization |
GO_0006886 | Biological process | intracellular protein transport |
GO_0006888 | Biological process | endoplasmic reticulum to Golgi vesicle-mediated transport |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0012507 | Cellular component | ER to Golgi transport vesicle membrane |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005829 | Cellular component | cytosol |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0030134 | Cellular component | COPII-coated ER to Golgi transport vesicle |
GO_0005793 | Cellular component | endoplasmic reticulum-Golgi intermediate compartment |
GO_0005737 | Cellular component | cytoplasm |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | SEC23IP |
Protein name | SEC23 interacting protein SEC23-interacting protein (p125) |
Synonyms | MSTP053 |
Description | FUNCTION: Plays a role in the organization of endoplasmic reticulum exit sites. Specifically binds to phosphatidylinositol 3-phosphate (PI(3)P), phosphatidylinositol 4-phosphate (PI(4)P) and phosphatidylinositol 5-phosphate (PI(5)P). . |
Accessions | ENST00000705471.1 ENST00000442952.1 H7C4C4 Q9Y6Y8 ENST00000446561.1 H7C0V8 ENST00000369075.8 [Q9Y6Y8-1] A0A994J542 |