Insufficient scRNA-seq data for expression of DDX47 at single-cell level.
Insufficient scRNA-seq data for expression of DDX47 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 77% | 6.25 | 1114 / 1445 | 47% | 0.79 | 86 / 183 |
lung | 92% | 16.79 | 533 / 578 | 30% | 0.52 | 341 / 1155 |
thymus | 91% | 12.81 | 597 / 653 | 26% | 0.38 | 159 / 605 |
ovary | 91% | 11.18 | 164 / 180 | 20% | 0.27 | 85 / 430 |
breast | 97% | 20.49 | 443 / 459 | 12% | 0.18 | 130 / 1118 |
bladder | 81% | 12.71 | 17 / 21 | 27% | 0.47 | 135 / 504 |
uterus | 88% | 10.22 | 150 / 170 | 18% | 0.30 | 83 / 459 |
skin | 94% | 18.77 | 1702 / 1809 | 11% | 0.16 | 51 / 472 |
pancreas | 70% | 4.59 | 229 / 328 | 27% | 0.43 | 48 / 178 |
adipose | 93% | 15.34 | 1123 / 1204 | 0% | 0 | 0 / 0 |
intestine | 78% | 7.54 | 758 / 966 | 15% | 0.24 | 77 / 527 |
stomach | 75% | 6.29 | 270 / 359 | 15% | 0.28 | 44 / 286 |
blood vessel | 79% | 8.40 | 1052 / 1335 | 0% | 0 | 0 / 0 |
prostate | 74% | 5.59 | 182 / 245 | 3% | 0.04 | 17 / 502 |
spleen | 66% | 5.07 | 159 / 241 | 0% | 0 | 0 / 0 |
adrenal gland | 63% | 4.09 | 162 / 258 | 1% | 0.02 | 3 / 230 |
kidney | 45% | 2.99 | 40 / 89 | 19% | 0.29 | 170 / 901 |
heart | 54% | 3.78 | 469 / 861 | 0% | 0 | 0 / 0 |
brain | 26% | 1.37 | 679 / 2642 | 22% | 0.30 | 152 / 705 |
liver | 27% | 1.23 | 62 / 226 | 4% | 0.05 | 18 / 406 |
peripheral blood | 32% | 3.78 | 293 / 929 | 0% | 0 | 0 / 0 |
muscle | 31% | 1.66 | 245 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 10% | 0.12 | 3 / 29 |
tonsil | 0% | 0 | 0 / 0 | 7% | 0.10 | 3 / 45 |
eye | 0% | 0 | 0 / 0 | 6% | 0.07 | 5 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0008625 | Biological process | extrinsic apoptotic signaling pathway via death domain receptors |
GO_0008380 | Biological process | RNA splicing |
GO_0006397 | Biological process | mRNA processing |
GO_0006364 | Biological process | rRNA processing |
GO_0005730 | Cellular component | nucleolus |
GO_0005654 | Cellular component | nucleoplasm |
GO_0016020 | Cellular component | membrane |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
GO_0003724 | Molecular function | RNA helicase activity |
GO_0016887 | Molecular function | ATP hydrolysis activity |
GO_0005524 | Molecular function | ATP binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | DDX47 |
Protein name | Probable ATP-dependent RNA helicase DDX47 (EC 3.6.4.13) (DEAD box protein 47) RNA helicase (EC 3.6.4.13) |
Synonyms | |
Description | FUNCTION: Required for efficient ribosome biogenesis (By similarity). May have a role in mRNA splicing . Involved in apoptosis . . |
Accessions | ENST00000352940.8 [Q9H0S4-2] Q9H0S4 ENST00000358007.7 [Q9H0S4-1] ENST00000544400.1 F5H1N9 |