Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 18 studies | 84% ± 13% | |
lung | 17 studies | 75% ± 16% | |
intestine | 13 studies | 72% ± 23% | |
kidney | 8 studies | 75% ± 19% | |
brain | 8 studies | 37% ± 21% | |
eye | 8 studies | 51% ± 20% | |
liver | 7 studies | 54% ± 29% | |
bone marrow | 6 studies | 69% ± 29% | |
uterus | 5 studies | 82% ± 14% | |
pancreas | 4 studies | 82% ± 14% | |
lymph node | 4 studies | 77% ± 14% | |
placenta | 4 studies | 85% ± 16% | |
prostate | 4 studies | 81% ± 8% | |
skin | 4 studies | 76% ± 18% | |
breast | 4 studies | 89% ± 4% | |
heart | 3 studies | 46% ± 20% | |
esophagus | 3 studies | 80% ± 8% | |
stomach | 3 studies | 43% ± 23% | |
thymus | 3 studies | 83% ± 20% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 17230.63 | 258 / 258 | 100% | 280.19 | 230 / 230 |
intestine | 100% | 10234.57 | 966 / 966 | 100% | 388.09 | 525 / 527 |
esophagus | 99% | 9364.98 | 1437 / 1445 | 100% | 517.96 | 183 / 183 |
prostate | 100% | 9404.36 | 244 / 245 | 99% | 300.33 | 499 / 502 |
bladder | 100% | 11429.57 | 21 / 21 | 99% | 278.09 | 498 / 504 |
uterus | 99% | 10064.94 | 168 / 170 | 100% | 269.06 | 457 / 459 |
skin | 100% | 11537.36 | 1800 / 1809 | 99% | 214.72 | 466 / 472 |
stomach | 99% | 8079.00 | 356 / 359 | 99% | 495.85 | 283 / 286 |
breast | 99% | 10249.40 | 456 / 459 | 99% | 248.64 | 1102 / 1118 |
liver | 100% | 7268.95 | 225 / 226 | 98% | 178.08 | 399 / 406 |
ovary | 97% | 15593.73 | 174 / 180 | 100% | 1336.72 | 430 / 430 |
thymus | 99% | 8622.81 | 647 / 653 | 98% | 269.00 | 590 / 605 |
pancreas | 98% | 9226.06 | 323 / 328 | 97% | 231.50 | 172 / 178 |
kidney | 100% | 9033.93 | 89 / 89 | 94% | 187.77 | 848 / 901 |
lung | 96% | 7856.03 | 555 / 578 | 97% | 264.48 | 1119 / 1155 |
brain | 95% | 5037.08 | 2508 / 2642 | 93% | 208.08 | 658 / 705 |
eye | 0% | 0 | 0 / 0 | 100% | 385.33 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 546.53 | 29 / 29 |
tonsil | 0% | 0 | 0 / 0 | 100% | 220.50 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 228.66 | 1 / 1 |
spleen | 100% | 12171.84 | 240 / 241 | 0% | 0 | 0 / 0 |
adipose | 99% | 9354.91 | 1194 / 1204 | 0% | 0 | 0 / 0 |
muscle | 99% | 6817.24 | 796 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 8365.63 | 1316 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 6470.37 | 842 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 81% | 8621.90 | 749 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006412 | Biological process | translation |
GO_0033119 | Biological process | negative regulation of RNA splicing |
GO_0002181 | Biological process | cytoplasmic translation |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0045202 | Cellular component | synapse |
GO_0015935 | Cellular component | small ribosomal subunit |
GO_0016020 | Cellular component | membrane |
GO_0098556 | Cellular component | cytoplasmic side of rough endoplasmic reticulum membrane |
GO_0022627 | Cellular component | cytosolic small ribosomal subunit |
GO_0005840 | Cellular component | ribosome |
GO_0005737 | Cellular component | cytoplasm |
GO_0045296 | Molecular function | cadherin binding |
GO_0003735 | Molecular function | structural constituent of ribosome |
GO_0005515 | Molecular function | protein binding |
GO_0003729 | Molecular function | mRNA binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | RPS26 |
Protein name | 40S ribosomal protein S26 Small ribosomal subunit protein eS26 (40S ribosomal protein S26) |
Synonyms | hCG_1745083 tcag7.125 LOC285938 |
Description | FUNCTION: Component of the small ribosomal subunit . The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell . . |
Accessions | Q75MH1 P62854 ENST00000646449.2 ENST00000356464.10 ENST00000552361.1 |