Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 9 studies | 28% ± 7% | |
smooth muscle cell | 5 studies | 19% ± 3% | |
fibroblast | 5 studies | 24% ± 6% | |
myofibroblast cell | 4 studies | 19% ± 4% | |
pericyte | 4 studies | 21% ± 3% | |
epithelial cell | 4 studies | 39% ± 13% | |
basal cell | 4 studies | 25% ± 6% | |
conventional dendritic cell | 3 studies | 25% ± 9% | |
hematopoietic precursor cell | 3 studies | 22% ± 3% | |
connective tissue cell | 3 studies | 19% ± 3% | |
ciliated cell | 3 studies | 24% ± 4% | |
macrophage | 3 studies | 20% ± 1% | |
endothelial cell of vascular tree | 3 studies | 20% ± 2% | |
dendritic cell | 3 studies | 29% ± 4% | |
natural killer cell | 3 studies | 19% ± 2% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 5 studies | 21% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 1406.78 | 459 / 459 | 100% | 35.75 | 1118 / 1118 |
esophagus | 100% | 1904.03 | 1445 / 1445 | 100% | 32.87 | 183 / 183 |
ovary | 100% | 1187.58 | 180 / 180 | 100% | 33.89 | 430 / 430 |
pancreas | 100% | 980.88 | 328 / 328 | 100% | 25.51 | 178 / 178 |
prostate | 100% | 1386.82 | 245 / 245 | 100% | 28.82 | 502 / 502 |
uterus | 100% | 1629.64 | 170 / 170 | 100% | 47.39 | 459 / 459 |
thymus | 100% | 1089.49 | 652 / 653 | 100% | 28.20 | 604 / 605 |
skin | 100% | 1742.98 | 1809 / 1809 | 100% | 41.12 | 470 / 472 |
liver | 100% | 751.81 | 225 / 226 | 100% | 17.67 | 406 / 406 |
brain | 100% | 1072.01 | 2630 / 2642 | 100% | 29.60 | 705 / 705 |
lung | 99% | 1286.13 | 575 / 578 | 100% | 32.98 | 1155 / 1155 |
bladder | 100% | 2174.81 | 21 / 21 | 99% | 36.22 | 501 / 504 |
intestine | 100% | 1786.97 | 966 / 966 | 99% | 28.60 | 523 / 527 |
stomach | 100% | 1317.71 | 359 / 359 | 99% | 28.01 | 283 / 286 |
adrenal gland | 100% | 1962.71 | 258 / 258 | 99% | 21.63 | 227 / 230 |
kidney | 100% | 967.72 | 89 / 89 | 99% | 19.06 | 888 / 901 |
adipose | 100% | 1497.40 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 33.09 | 29 / 29 |
muscle | 100% | 7228.04 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1171.83 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 40.14 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 16.51 | 1 / 1 |
blood vessel | 100% | 1444.67 | 1333 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 1264.01 | 844 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 98% | 21.15 | 78 / 80 |
peripheral blood | 67% | 753.93 | 620 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0043065 | Biological process | positive regulation of apoptotic process |
GO_0006364 | Biological process | rRNA processing |
GO_0007399 | Biological process | nervous system development |
GO_0042274 | Biological process | ribosomal small subunit biogenesis |
GO_0005730 | Cellular component | nucleolus |
GO_0005615 | Cellular component | extracellular space |
GO_0005654 | Cellular component | nucleoplasm |
GO_0032040 | Cellular component | small-subunit processome |
GO_0005737 | Cellular component | cytoplasm |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | UTP11 |
Protein name | Probable U3 small nucleolar RNA-associated protein 11 (U3 snoRNA-associated protein 11) (UTP11-like protein) |
Synonyms | HDCMB12P CGI-94 UTP11L |
Description | FUNCTION: Part of the small subunit (SSU) processome, first precursor of the small eukaryotic ribosomal subunit. During the assembly of the SSU processome in the nucleolus, many ribosome biogenesis factors, an RNA chaperone and ribosomal proteins associate with the nascent pre-rRNA and work in concert to generate RNA folding, modifications, rearrangements and cleavage as well as targeted degradation of pre-ribosomal RNA by the RNA exosome. Involved in nucleolar processing of pre-18S ribosomal RNA. . |
Accessions | Q9Y3A2 ENST00000373014.5 [Q9Y3A2-1] |