Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 19 studies | 85% ± 14% | |
lung | 18 studies | 78% ± 17% | |
intestine | 14 studies | 72% ± 26% | |
brain | 11 studies | 35% ± 21% | |
eye | 9 studies | 49% ± 24% | |
kidney | 8 studies | 75% ± 20% | |
liver | 7 studies | 60% ± 29% | |
bone marrow | 6 studies | 86% ± 11% | |
pancreas | 5 studies | 83% ± 16% | |
uterus | 5 studies | 87% ± 14% | |
lymph node | 4 studies | 94% ± 5% | |
placenta | 4 studies | 86% ± 19% | |
adipose | 4 studies | 46% ± 27% | |
esophagus | 4 studies | 64% ± 30% | |
prostate | 4 studies | 88% ± 18% | |
breast | 4 studies | 90% ± 5% | |
heart | 3 studies | 47% ± 19% | |
skin | 3 studies | 81% ± 15% | |
thymus | 3 studies | 80% ± 25% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 24788.09 | 1445 / 1445 | 100% | 684.83 | 183 / 183 |
ovary | 100% | 36435.28 | 180 / 180 | 100% | 1459.46 | 430 / 430 |
pancreas | 100% | 18288.21 | 328 / 328 | 100% | 809.55 | 178 / 178 |
skin | 100% | 37683.74 | 1809 / 1809 | 100% | 893.03 | 472 / 472 |
stomach | 100% | 18484.48 | 359 / 359 | 100% | 1056.35 | 286 / 286 |
uterus | 100% | 27580.59 | 170 / 170 | 100% | 1006.12 | 459 / 459 |
intestine | 100% | 24411.33 | 966 / 966 | 100% | 1087.08 | 526 / 527 |
prostate | 100% | 22846.14 | 245 / 245 | 100% | 1086.29 | 501 / 502 |
thymus | 100% | 17129.03 | 652 / 653 | 100% | 883.53 | 604 / 605 |
kidney | 100% | 17086.34 | 89 / 89 | 100% | 689.79 | 898 / 901 |
lung | 100% | 19589.34 | 576 / 578 | 100% | 1005.43 | 1155 / 1155 |
liver | 100% | 10391.85 | 225 / 226 | 100% | 678.73 | 406 / 406 |
bladder | 100% | 25318.19 | 21 / 21 | 99% | 1041.81 | 501 / 504 |
breast | 100% | 29522.80 | 459 / 459 | 99% | 830.08 | 1109 / 1118 |
brain | 99% | 11113.26 | 2622 / 2642 | 100% | 702.72 | 704 / 705 |
adrenal gland | 100% | 21960.71 | 258 / 258 | 97% | 514.71 | 224 / 230 |
adipose | 100% | 27238.42 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 1191.63 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 1668.62 | 29 / 29 |
spleen | 100% | 26469.90 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 889.83 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 959.18 | 1 / 1 |
blood vessel | 100% | 22863.41 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 22176.50 | 799 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 13766.99 | 843 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 85% | 18373.20 | 786 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006412 | Biological process | translation |
GO_1904044 | Biological process | response to aldosterone |
GO_0006364 | Biological process | rRNA processing |
GO_0002181 | Biological process | cytoplasmic translation |
GO_0005730 | Cellular component | nucleolus |
GO_0022626 | Cellular component | cytosolic ribosome |
GO_0098556 | Cellular component | cytoplasmic side of rough endoplasmic reticulum membrane |
GO_0005840 | Cellular component | ribosome |
GO_0016020 | Cellular component | membrane |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_0022625 | Cellular component | cytosolic large ribosomal subunit |
GO_0005925 | Cellular component | focal adhesion |
GO_0005829 | Cellular component | cytosol |
GO_0045202 | Cellular component | synapse |
GO_0005737 | Cellular component | cytoplasm |
GO_1990904 | Cellular component | ribonucleoprotein complex |
GO_0005634 | Cellular component | nucleus |
GO_0003735 | Molecular function | structural constituent of ribosome |
GO_0003723 | Molecular function | RNA binding |
GO_0005515 | Molecular function | protein binding |
Gene name | RPL27 |
Protein name | Ribosomal protein L27 60S ribosomal protein L27 Large ribosomal subunit protein eL27 (60S ribosomal protein L27) |
Synonyms | |
Description | FUNCTION: Component of the large ribosomal subunit . Required for proper rRNA processing and maturation of 28S and 5.8S rRNAs . . |
Accessions | ENST00000588830.1 K7ERY7 P61353 K7EQQ9 ENST00000590864.2 ENST00000589037.5 ENST00000589913.6 E4W6B6 K7ELC7 Q6LCU2 ENST00000586277.5 ENST00000253788.12 |