Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 22 studies | 28% ± 12% | |
classical monocyte | 19 studies | 26% ± 12% | |
plasma cell | 9 studies | 31% ± 12% | |
basal cell | 8 studies | 23% ± 7% | |
connective tissue cell | 8 studies | 40% ± 12% | |
epithelial cell | 7 studies | 38% ± 22% | |
goblet cell | 7 studies | 38% ± 15% | |
pericyte | 7 studies | 28% ± 9% | |
myofibroblast cell | 6 studies | 25% ± 5% | |
smooth muscle cell | 6 studies | 23% ± 6% | |
neutrophil | 5 studies | 31% ± 14% | |
abnormal cell | 5 studies | 30% ± 10% | |
mesothelial cell | 5 studies | 41% ± 18% | |
endothelial cell | 5 studies | 24% ± 9% | |
plasmablast | 4 studies | 52% ± 23% | |
monocyte | 4 studies | 22% ± 7% | |
myeloid cell | 4 studies | 43% ± 19% | |
adventitial cell | 4 studies | 23% ± 3% | |
respiratory goblet cell | 3 studies | 26% ± 11% | |
secretory cell | 3 studies | 21% ± 2% | |
pancreatic A cell | 3 studies | 29% ± 9% | |
transit amplifying cell | 3 studies | 20% ± 5% | |
ciliated cell | 3 studies | 26% ± 9% | |
GABAergic neuron | 3 studies | 25% ± 3% | |
glutamatergic neuron | 3 studies | 25% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
pancreas | 100% | 3349.56 | 328 / 328 | 100% | 132.76 | 178 / 178 |
prostate | 100% | 4421.47 | 245 / 245 | 100% | 149.70 | 502 / 502 |
breast | 100% | 3136.51 | 459 / 459 | 100% | 160.13 | 1115 / 1118 |
uterus | 100% | 5357.01 | 170 / 170 | 100% | 196.04 | 457 / 459 |
lung | 100% | 5144.81 | 576 / 578 | 100% | 175.40 | 1153 / 1155 |
esophagus | 100% | 5410.36 | 1444 / 1445 | 99% | 183.17 | 182 / 183 |
stomach | 100% | 5033.28 | 359 / 359 | 99% | 116.91 | 284 / 286 |
intestine | 100% | 3671.08 | 966 / 966 | 99% | 132.06 | 522 / 527 |
ovary | 100% | 4387.58 | 180 / 180 | 99% | 122.89 | 425 / 430 |
bladder | 100% | 5194.62 | 21 / 21 | 98% | 145.80 | 494 / 504 |
skin | 100% | 11200.00 | 1808 / 1809 | 96% | 130.74 | 455 / 472 |
thymus | 100% | 3183.93 | 652 / 653 | 96% | 70.14 | 581 / 605 |
adrenal gland | 100% | 5802.51 | 258 / 258 | 93% | 102.39 | 215 / 230 |
kidney | 98% | 2537.30 | 87 / 89 | 93% | 69.99 | 840 / 901 |
liver | 96% | 2442.12 | 218 / 226 | 94% | 104.07 | 382 / 406 |
brain | 74% | 1114.45 | 1944 / 2642 | 99% | 69.54 | 695 / 705 |
spleen | 100% | 3687.78 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 214.03 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 166.32 | 1 / 1 |
adipose | 100% | 3620.46 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 5451.00 | 1333 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 3776.25 | 843 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 96% | 7602.47 | 889 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 94% | 55.58 | 75 / 80 |
muscle | 79% | 1103.50 | 631 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 62% | 36.79 | 18 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0005788 | Cellular component | endoplasmic reticulum lumen |
GO_0035577 | Cellular component | azurophil granule membrane |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005856 | Cellular component | cytoskeleton |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005791 | Cellular component | rough endoplasmic reticulum |
GO_0035579 | Cellular component | specific granule membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0005811 | Cellular component | lipid droplet |
GO_0042599 | Cellular component | lamellar body |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | CKAP4 |
Protein name | Cytoskeleton associated protein 4 Cytoskeleton-associated protein 4 (63-kDa cytoskeleton-linking membrane protein) (Climp-63) (p63) CKAP4 protein |
Synonyms | |
Description | FUNCTION: Mediates the anchoring of the endoplasmic reticulum to microtubules. .; FUNCTION: High-affinity epithelial cell surface receptor for the FZD8-related low molecular weight sialoglycopeptide APF/antiproliferative factor. Mediates the APF antiproliferative signaling within cells. . |
Accessions | Q6NWZ1 ENST00000553039.1 F8VVU0 Q07065 ENST00000378026.5 |