Name | Number of supported studies | Average coverage | |
---|---|---|---|
hepatocyte | 4 studies | 40% ± 26% | |
placental villous trophoblast | 3 studies | 70% ± 6% | |
epithelial cell | 3 studies | 19% ± 4% | |
erythrocyte | 3 studies | 31% ± 17% | |
macrophage | 3 studies | 16% ± 0% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
placenta | 3 studies | 35% ± 13% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 100% | 984.59 | 651 / 653 | 98% | 7.20 | 591 / 605 |
pancreas | 99% | 840.28 | 326 / 328 | 97% | 10.90 | 173 / 178 |
liver | 100% | 4468.18 | 226 / 226 | 97% | 38.72 | 392 / 406 |
stomach | 99% | 1005.67 | 357 / 359 | 96% | 12.33 | 274 / 286 |
ovary | 98% | 931.43 | 176 / 180 | 97% | 9.21 | 415 / 430 |
adrenal gland | 100% | 3097.40 | 258 / 258 | 93% | 10.15 | 215 / 230 |
bladder | 100% | 2123.90 | 21 / 21 | 93% | 8.08 | 470 / 504 |
lung | 99% | 906.33 | 572 / 578 | 94% | 7.86 | 1083 / 1155 |
uterus | 100% | 1291.09 | 170 / 170 | 91% | 8.53 | 417 / 459 |
kidney | 100% | 1204.26 | 89 / 89 | 85% | 7.72 | 769 / 901 |
prostate | 97% | 767.49 | 238 / 245 | 82% | 4.77 | 410 / 502 |
esophagus | 79% | 817.25 | 1148 / 1445 | 98% | 18.04 | 180 / 183 |
breast | 100% | 961.76 | 458 / 459 | 73% | 4.79 | 819 / 1118 |
skin | 97% | 1278.11 | 1750 / 1809 | 76% | 6.15 | 357 / 472 |
intestine | 68% | 836.12 | 657 / 966 | 95% | 9.31 | 500 / 527 |
spleen | 100% | 1538.96 | 241 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 100% | 2949.02 | 928 / 929 | 0% | 0 | 0 / 0 |
adipose | 100% | 1378.67 | 1202 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 11.02 | 28 / 29 |
tonsil | 0% | 0 | 0 / 0 | 96% | 9.41 | 43 / 45 |
heart | 77% | 1882.49 | 665 / 861 | 0% | 0 | 0 / 0 |
brain | 31% | 131.30 | 810 / 2642 | 39% | 1.67 | 275 / 705 |
blood vessel | 55% | 261.72 | 730 / 1335 | 0% | 0 | 0 / 0 |
muscle | 14% | 48.49 | 112 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 4% | 0.10 | 3 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0043484 | Biological process | regulation of RNA splicing |
GO_0045662 | Biological process | negative regulation of myoblast differentiation |
GO_0008380 | Biological process | RNA splicing |
GO_0006397 | Biological process | mRNA processing |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | MBNL3 |
Protein name | Muscleblind-like protein 3 (Cys3His CCG1-required protein) (Muscleblind-like X-linked protein) (Protein HCHCR) Muscleblind like splicing regulator 3 |
Synonyms | MBLX39 MBXL CHCR |
Description | FUNCTION: Mediates pre-mRNA alternative splicing regulation. Acts either as activator or repressor of splicing on specific pre-mRNA targets. Inhibits cardiac troponin-T (TNNT2) pre-mRNA exon inclusion but induces insulin receptor (IR) pre-mRNA exon inclusion in muscle. Antagonizes the alternative splicing activity pattern of CELF proteins. May play a role in myotonic dystrophy pathophysiology (DM). Could inhibit terminal muscle differentiation, acting at approximately the time of myogenin induction. . |
Accessions | ENST00000538204.6 [Q9NUK0-4] ENST00000442191.6 ENST00000436215.5 ENST00000370849.7 [Q9NUK0-3] ENST00000370839.7 [Q9NUK0-2] ENST00000473364.2 B1AKI2 B1AKI5 ENST00000698663.1 ENST00000421707.1 B1AKI6 ENST00000370857.7 Q9NUK0 ENST00000394311.7 [Q9NUK0-5] ENST00000370853.8 [Q9NUK0-1] B1AKI4 A0A8V8TM16 A0A8V8TNS0 ENST00000370844.5 [Q9NUK0-5] ENST00000698664.1 [Q9NUK0-1] |