Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 15 studies | 23% ± 9% | |
plasma cell | 12 studies | 39% ± 13% | |
plasmablast | 10 studies | 46% ± 22% | |
epithelial cell | 10 studies | 33% ± 19% | |
basal cell | 8 studies | 26% ± 9% | |
classical monocyte | 7 studies | 23% ± 7% | |
plasmacytoid dendritic cell | 7 studies | 23% ± 8% | |
endothelial cell | 7 studies | 24% ± 7% | |
pericyte | 7 studies | 20% ± 3% | |
CD4-positive, alpha-beta T cell | 6 studies | 22% ± 10% | |
goblet cell | 6 studies | 28% ± 13% | |
connective tissue cell | 6 studies | 27% ± 9% | |
CD8-positive, alpha-beta T cell | 6 studies | 21% ± 7% | |
non-classical monocyte | 5 studies | 25% ± 7% | |
erythroblast | 5 studies | 33% ± 14% | |
natural killer cell | 5 studies | 23% ± 5% | |
ciliated cell | 5 studies | 28% ± 11% | |
macrophage | 5 studies | 21% ± 5% | |
conventional dendritic cell | 4 studies | 33% ± 7% | |
hematopoietic precursor cell | 4 studies | 28% ± 4% | |
transit amplifying cell | 4 studies | 19% ± 3% | |
myofibroblast cell | 4 studies | 18% ± 4% | |
secretory cell | 4 studies | 22% ± 4% | |
endothelial cell of vascular tree | 4 studies | 19% ± 2% | |
extravillous trophoblast | 3 studies | 27% ± 14% | |
common myeloid progenitor | 3 studies | 21% ± 5% | |
smooth muscle cell | 3 studies | 22% ± 5% | |
myeloid cell | 3 studies | 25% ± 9% | |
pro-B cell | 3 studies | 21% ± 2% | |
monocyte | 3 studies | 21% ± 2% | |
abnormal cell | 3 studies | 22% ± 3% | |
luminal hormone-sensing cell of mammary gland | 3 studies | 35% ± 7% | |
dendritic cell | 3 studies | 39% ± 8% | |
granulocyte monocyte progenitor cell | 3 studies | 27% ± 12% | |
T cell | 3 studies | 16% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
intestine | 100% | 4454.93 | 966 / 966 | 100% | 154.10 | 527 / 527 |
pancreas | 100% | 7394.18 | 328 / 328 | 100% | 92.00 | 178 / 178 |
stomach | 100% | 5806.96 | 359 / 359 | 100% | 140.75 | 286 / 286 |
esophagus | 100% | 3871.03 | 1444 / 1445 | 100% | 123.15 | 183 / 183 |
breast | 100% | 4029.34 | 459 / 459 | 100% | 143.49 | 1117 / 1118 |
lung | 100% | 5475.21 | 577 / 578 | 100% | 120.82 | 1155 / 1155 |
uterus | 100% | 3222.11 | 170 / 170 | 100% | 105.56 | 457 / 459 |
ovary | 100% | 2408.51 | 180 / 180 | 100% | 70.58 | 428 / 430 |
prostate | 100% | 4166.31 | 245 / 245 | 99% | 106.34 | 499 / 502 |
skin | 100% | 6267.43 | 1807 / 1809 | 99% | 131.13 | 469 / 472 |
bladder | 100% | 4133.76 | 21 / 21 | 99% | 124.30 | 500 / 504 |
thymus | 100% | 3758.98 | 653 / 653 | 98% | 54.87 | 594 / 605 |
liver | 100% | 4553.76 | 225 / 226 | 98% | 72.79 | 397 / 406 |
kidney | 100% | 3559.18 | 89 / 89 | 96% | 55.63 | 863 / 901 |
brain | 96% | 1948.80 | 2527 / 2642 | 100% | 65.79 | 704 / 705 |
adrenal gland | 100% | 8934.15 | 258 / 258 | 87% | 43.03 | 199 / 230 |
adipose | 100% | 4617.89 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 74.94 | 29 / 29 |
spleen | 100% | 3696.66 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 92.30 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 53.47 | 1 / 1 |
blood vessel | 100% | 4186.01 | 1333 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 65.68 | 79 / 80 |
heart | 94% | 2427.60 | 807 / 861 | 0% | 0 | 0 / 0 |
muscle | 90% | 2149.52 | 722 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 88% | 2384.10 | 821 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007165 | Biological process | signal transduction |
GO_0006470 | Biological process | protein dephosphorylation |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0042645 | Cellular component | mitochondrial nucleoid |
GO_0005635 | Cellular component | nuclear envelope |
GO_0016020 | Cellular component | membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0045296 | Molecular function | cadherin binding |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
GO_0004722 | Molecular function | protein serine/threonine phosphatase activity |
Gene name | LRRC59 |
Protein name | Leucine-rich repeat-containing protein 59 (Ribosome-binding protein p34) (p34) [Cleaved into: Leucine-rich repeat-containing protein 59, N-terminally processed] Leucine rich repeat containing 59 |
Synonyms | PRO1855 |
Description | FUNCTION: Required for nuclear import of FGF1, but not that of FGF2. Might regulate nuclear import of exogenous FGF1 by facilitating interaction with the nuclear import machinery and by transporting cytosolic FGF1 to, and possibly through, the nuclear pores. . |
Accessions | I3L223 I3L2E8 Q96AG4 ENST00000576448.1 ENST00000225972.8 ENST00000503118.2 |