RBMS1 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
endothelial cell	47 studies	42% ± 17%	Explore
fibroblast	45 studies	42% ± 17%	Explore
pericyte	33 studies	42% ± 16%	Explore
macrophage	31 studies	34% ± 16%	Explore
smooth muscle cell	30 studies	35% ± 14%	Explore
natural killer cell	26 studies	24% ± 8%	Explore
CD4-positive, alpha-beta T cell	25 studies	29% ± 11%	Explore
T cell	22 studies	27% ± 10%	Explore
endothelial cell of lymphatic vessel	22 studies	37% ± 14%	Explore
classical monocyte	20 studies	31% ± 11%	Explore
monocyte	18 studies	28% ± 11%	Explore
connective tissue cell	16 studies	33% ± 12%	Explore
CD8-positive, alpha-beta T cell	15 studies	25% ± 6%	Explore
capillary endothelial cell	15 studies	34% ± 10%	Explore
myofibroblast cell	15 studies	37% ± 14%	Explore
non-classical monocyte	13 studies	26% ± 12%	Explore
vein endothelial cell	13 studies	34% ± 14%	Explore
mucosal invariant T cell	13 studies	32% ± 11%	Explore
basal cell	13 studies	29% ± 11%	Explore
endothelial cell of vascular tree	13 studies	31% ± 9%	Explore
type I pneumocyte	12 studies	38% ± 16%	Explore
CD16-positive, CD56-dim natural killer cell, human	12 studies	26% ± 7%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	12 studies	28% ± 10%	Explore
CD16-negative, CD56-bright natural killer cell, human	12 studies	29% ± 8%	Explore
mesothelial cell	12 studies	39% ± 14%	Explore
gamma-delta T cell	12 studies	25% ± 8%	Explore
microglial cell	12 studies	36% ± 16%	Explore
myeloid cell	12 studies	41% ± 15%	Explore
mature NK T cell	11 studies	26% ± 11%	Explore
ciliated cell	11 studies	28% ± 8%	Explore
oligodendrocyte precursor cell	10 studies	30% ± 13%	Explore
endothelial cell of artery	10 studies	26% ± 5%	Explore
epithelial cell	10 studies	39% ± 15%	Explore
adipocyte	10 studies	55% ± 13%	Explore
CD8-positive, alpha-beta memory T cell	9 studies	26% ± 7%	Explore
neuron	9 studies	44% ± 21%	Explore
glutamatergic neuron	9 studies	39% ± 22%	Explore
dendritic cell	9 studies	30% ± 11%	Explore
GABAergic neuron	8 studies	43% ± 17%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	8 studies	24% ± 7%	Explore
innate lymphoid cell	8 studies	33% ± 13%	Explore
effector memory CD8-positive, alpha-beta T cell	7 studies	34% ± 12%	Explore
leukocyte	7 studies	34% ± 20%	Explore
mast cell	7 studies	29% ± 10%	Explore
club cell	7 studies	34% ± 14%	Explore
CD4-positive, alpha-beta memory T cell	7 studies	26% ± 8%	Explore
type II pneumocyte	7 studies	39% ± 11%	Explore
retinal ganglion cell	6 studies	43% ± 16%	Explore
astrocyte	6 studies	34% ± 12%	Explore
plasmacytoid dendritic cell	6 studies	27% ± 6%	Explore
neutrophil	5 studies	20% ± 3%	Explore
podocyte	5 studies	63% ± 12%	Explore
interneuron	5 studies	35% ± 7%	Explore
adventitial cell	5 studies	45% ± 13%	Explore
cardiac muscle cell	5 studies	55% ± 13%	Explore
mononuclear phagocyte	5 studies	34% ± 13%	Explore
lymphocyte	5 studies	43% ± 16%	Explore
effector memory CD4-positive, alpha-beta T cell	5 studies	27% ± 8%	Explore
secretory cell	5 studies	27% ± 10%	Explore
alveolar macrophage	5 studies	39% ± 20%	Explore
endothelial cell of sinusoid	4 studies	31% ± 12%	Explore
conventional dendritic cell	4 studies	33% ± 12%	Explore
glomerular endothelial cell	4 studies	59% ± 8%	Explore
progenitor cell	4 studies	29% ± 9%	Explore
glial cell	4 studies	33% ± 11%	Explore
B cell	4 studies	23% ± 6%	Explore
respiratory goblet cell	4 studies	36% ± 10%	Explore
T follicular helper cell	4 studies	28% ± 6%	Explore
squamous epithelial cell	3 studies	44% ± 21%	Explore
hepatic stellate cell	3 studies	48% ± 23%	Explore
hematopoietic precursor cell	3 studies	27% ± 3%	Explore
abnormal cell	3 studies	37% ± 26%	Explore
GABAergic interneuron	3 studies	33% ± 14%	Explore
placental villous trophoblast	3 studies	41% ± 23%	Explore
retinal pigment epithelial cell	3 studies	35% ± 26%	Explore
endocardial cell	3 studies	38% ± 9%	Explore
Mueller cell	3 studies	24% ± 10%	Explore
hepatocyte	3 studies	31% ± 10%	Explore
muscle cell	3 studies	51% ± 7%	Explore
chondrocyte	3 studies	33% ± 11%	Explore
group 3 innate lymphoid cell	3 studies	41% ± 11%	Explore
Schwann cell	3 studies	41% ± 17%	Explore
T-helper 17 cell	3 studies	26% ± 9%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	3 studies	24% ± 7%	Explore
central memory CD4-positive, alpha-beta T cell	3 studies	20% ± 5%	Explore
kidney distal convoluted tubule epithelial cell	3 studies	23% ± 8%	Explore
mucus secreting cell	3 studies	26% ± 8%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
lung	15 studies	33% ± 11%	Explore
peripheral blood	14 studies	23% ± 9%	Explore
brain	11 studies	31% ± 18%	Explore
kidney	6 studies	26% ± 8%	Explore
heart	5 studies	49% ± 12%	Explore
liver	5 studies	34% ± 19%	Explore
intestine	4 studies	25% ± 11%	Explore
placenta	4 studies	32% ± 21%	Explore
uterus	4 studies	29% ± 5%	Explore
breast	4 studies	23% ± 5%	Explore
adipose	4 studies	50% ± 22%	Explore
bone marrow	3 studies	28% ± 12%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
ovary	100%	7813.16	180 / 180	100%	20.36	428 / 430
lung	100%	9874.51	578 / 578	99%	24.81	1146 / 1155
uterus	100%	8771.16	170 / 170	99%	24.33	455 / 459
thymus	100%	5171.23	652 / 653	99%	15.51	600 / 605
breast	100%	7375.75	459 / 459	98%	18.49	1093 / 1118
kidney	100%	4906.02	89 / 89	97%	19.58	877 / 901
esophagus	100%	6159.55	1445 / 1445	97%	22.28	178 / 183
skin	100%	7459.03	1807 / 1809	97%	22.50	457 / 472
adrenal gland	100%	3156.01	258 / 258	95%	19.54	219 / 230
bladder	100%	7017.05	21 / 21	90%	21.03	455 / 504
prostate	100%	5071.16	245 / 245	90%	9.50	453 / 502
stomach	92%	3310.30	332 / 359	80%	11.13	230 / 286
intestine	98%	5723.51	942 / 966	64%	8.19	338 / 527
pancreas	39%	617.06	127 / 328	96%	23.24	171 / 178
liver	61%	1046.38	138 / 226	63%	6.26	254 / 406
brain	46%	757.15	1212 / 2642	71%	7.58	498 / 705
adipose	100%	9772.81	1204 / 1204	0%	0	0 / 0
spleen	100%	6414.22	241 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	18.47	1 / 1
blood vessel	100%	7426.77	1334 / 1335	0%	0	0 / 0
heart	100%	5032.23	857 / 861	0%	0	0 / 0
tonsil	0%	0	0 / 0	98%	17.99	44 / 45
lymph node	0%	0	0 / 0	90%	11.05	26 / 29
muscle	85%	1575.69	680 / 803	0%	0	0 / 0
peripheral blood	77%	3992.88	711 / 929	0%	0	0 / 0
eye	0%	0	0 / 0	51%	4.18	41 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

III. Associated gene sets

GO_0006260	Biological process	DNA replication
GO_0006396	Biological process	RNA processing
GO_1990904	Cellular component	ribonucleoprotein complex
GO_0005829	Cellular component	cytosol
GO_0005634	Cellular component	nucleus
GO_0003690	Molecular function	double-stranded DNA binding
GO_0008143	Molecular function	poly(A) binding
GO_0003730	Molecular function	mRNA 3'-UTR binding
GO_0008266	Molecular function	poly(U) RNA binding
GO_0005515	Molecular function	protein binding
GO_0003697	Molecular function	single-stranded DNA binding
GO_0003723	Molecular function	RNA binding

IV. Literature review

[source]

Gene name	RBMS1
Protein name	RNA binding motif single stranded interacting protein 1 isoform 2 RNA binding motif single stranded interacting protein 1 RNA binding motif single stranded interacting protein 1 isoform 1 RNA-binding motif, single-stranded-interacting protein 1 (Single-stranded DNA-binding protein MSSP-1) (Suppressor of CDC2 with RNA-binding motif 2)
Synonyms	SCR2 MSSP MSSP1 C2orf12
Description	FUNCTION: Single-stranded DNA binding protein that interacts with the region upstream of the MYC gene. Binds specifically to the DNA sequence motif 5'-[AT]CT[AT][AT]T-3'. Probably has a role in DNA replication.
Accessions	ENST00000409075.5 A0A0S2Z4B3 ENST00000409972.5 P29558 ENST00000409289.6 ENST00000348849.8 [P29558-1] ENST00000428519.1 A0A0S2Z499 E7ETU5 E7EPF2

RBMS1 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review