PRPF3 | OmnibusX

Name	Number of supported studies	Average coverage
endothelial cell	7 studies	25% ± 8%	Explore
epithelial cell	4 studies	31% ± 5%	Explore
astrocyte	4 studies	28% ± 9%	Explore
endothelial cell of lymphatic vessel	4 studies	18% ± 3%	Explore
lymphocyte	3 studies	21% ± 5%	Explore
GABAergic neuron	3 studies	23% ± 7%	Explore
glutamatergic neuron	3 studies	31% ± 13%	Explore
abnormal cell	3 studies	24% ± 7%	Explore
goblet cell	3 studies	28% ± 14%	Explore
adipocyte	3 studies	17% ± 2%	Explore
oligodendrocyte	3 studies	20% ± 3%	Explore

Name	Number of supported studies	Average coverage
brain	4 studies	28% ± 9%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
bladder	100%	4613.52	21 / 21	100%	32.62	504 / 504
breast	100%	5425.93	459 / 459	100%	46.63	1118 / 1118
esophagus	100%	3786.60	1445 / 1445	100%	25.50	183 / 183
lung	100%	4661.55	578 / 578	100%	34.30	1155 / 1155
stomach	100%	2900.10	359 / 359	100%	24.51	286 / 286
uterus	100%	5880.35	170 / 170	100%	37.73	459 / 459
intestine	100%	4480.64	966 / 966	100%	26.21	526 / 527
ovary	100%	6570.56	180 / 180	100%	26.91	429 / 430
prostate	100%	5837.64	245 / 245	100%	23.83	500 / 502
brain	99%	2808.96	2626 / 2642	100%	32.14	705 / 705
thymus	100%	6856.62	653 / 653	99%	28.12	601 / 605
skin	100%	4054.66	1809 / 1809	99%	29.91	468 / 472
pancreas	100%	2726.02	328 / 328	99%	28.01	176 / 178
liver	100%	2989.87	226 / 226	98%	20.98	397 / 406
adrenal gland	100%	4251.92	258 / 258	96%	20.50	221 / 230
kidney	100%	3930.80	89 / 89	95%	21.84	854 / 901
adipose	100%	4717.31	1204 / 1204	0%	0	0 / 0
blood vessel	100%	3867.48	1335 / 1335	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	35.24	29 / 29
spleen	100%	6467.43	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	26.85	45 / 45
ureter	0%	0	0 / 0	100%	13.37	1 / 1
heart	99%	2216.10	855 / 861	0%	0	0 / 0
muscle	99%	2027.72	795 / 803	0%	0	0 / 0
peripheral blood	97%	2766.60	905 / 929	0%	0	0 / 0
eye	0%	0	0 / 0	95%	16.94	76 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

GO_0000398	Biological process	mRNA splicing, via spliceosome
GO_0008380	Biological process	RNA splicing
GO_0000375	Biological process	RNA splicing, via transesterification reactions
GO_0006397	Biological process	mRNA processing
GO_0000244	Biological process	spliceosomal tri-snRNP complex assembly
GO_0015030	Cellular component	Cajal body
GO_0016607	Cellular component	nuclear speck
GO_0046540	Cellular component	U4/U6 x U5 tri-snRNP complex
GO_0005654	Cellular component	nucleoplasm
GO_0005829	Cellular component	cytosol
GO_0005681	Cellular component	spliceosomal complex
GO_0071005	Cellular component	U2-type precatalytic spliceosome
GO_0005634	Cellular component	nucleus
GO_0042802	Molecular function	identical protein binding
GO_0005515	Molecular function	protein binding
GO_0003723	Molecular function	RNA binding

Gene name	PRPF3
Protein name	U4/U6 small nuclear ribonucleoprotein Prp3 (Pre-mRNA-splicing factor 3) (hPrp3) (U4/U6 snRNP 90 kDa protein)
Synonyms	HPRP3 PRP3
Description	FUNCTION: Plays a role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). .
Accessions	ENST00000324862.7 [O43395-1] O43395

PRPF3 report