STIP1 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
natural killer cell	19 studies	24% ± 10%	Explore
endothelial cell	15 studies	26% ± 10%	Explore
CD8-positive, alpha-beta T cell	12 studies	27% ± 12%	Explore
B cell	11 studies	21% ± 4%	Explore
macrophage	11 studies	24% ± 10%	Explore
T cell	11 studies	23% ± 7%	Explore
ciliated cell	10 studies	32% ± 13%	Explore
CD4-positive, alpha-beta T cell	9 studies	30% ± 16%	Explore
smooth muscle cell	9 studies	21% ± 3%	Explore
regulatory T cell	9 studies	28% ± 11%	Explore
conventional dendritic cell	8 studies	26% ± 12%	Explore
pericyte	8 studies	20% ± 6%	Explore
epithelial cell	8 studies	33% ± 19%	Explore
basal cell	8 studies	24% ± 9%	Explore
gamma-delta T cell	8 studies	29% ± 16%	Explore
fibroblast	7 studies	27% ± 6%	Explore
endothelial cell of lymphatic vessel	6 studies	21% ± 7%	Explore
CD16-negative, CD56-bright natural killer cell, human	6 studies	23% ± 5%	Explore
myofibroblast cell	5 studies	20% ± 3%	Explore
innate lymphoid cell	5 studies	24% ± 9%	Explore
abnormal cell	5 studies	24% ± 4%	Explore
effector CD4-positive, alpha-beta T cell	5 studies	20% ± 3%	Explore
effector CD8-positive, alpha-beta T cell	5 studies	28% ± 9%	Explore
endothelial cell of vascular tree	5 studies	18% ± 2%	Explore
mast cell	5 studies	18% ± 2%	Explore
CD8-positive, alpha-beta memory T cell	5 studies	22% ± 5%	Explore
memory B cell	5 studies	23% ± 7%	Explore
classical monocyte	4 studies	20% ± 7%	Explore
effector memory CD8-positive, alpha-beta T cell	4 studies	17% ± 1%	Explore
non-classical monocyte	4 studies	22% ± 5%	Explore
connective tissue cell	4 studies	24% ± 5%	Explore
monocyte	4 studies	18% ± 3%	Explore
retinal ganglion cell	4 studies	48% ± 26%	Explore
CD16-positive, CD56-dim natural killer cell, human	4 studies	21% ± 5%	Explore
precursor B cell	4 studies	29% ± 10%	Explore
leukocyte	4 studies	25% ± 6%	Explore
mucosal invariant T cell	4 studies	19% ± 2%	Explore
naive B cell	4 studies	21% ± 6%	Explore
ionocyte	3 studies	32% ± 2%	Explore
pancreatic A cell	3 studies	33% ± 6%	Explore
hematopoietic precursor cell	3 studies	28% ± 10%	Explore
mature NK T cell	3 studies	19% ± 2%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	3 studies	18% ± 2%	Explore
progenitor cell	3 studies	30% ± 18%	Explore
neural crest cell	3 studies	20% ± 1%	Explore
myeloid cell	3 studies	25% ± 8%	Explore
plasma cell	3 studies	40% ± 3%	Explore
capillary endothelial cell	3 studies	20% ± 2%	Explore
immature B cell	3 studies	23% ± 6%	Explore
neuron	3 studies	38% ± 4%	Explore
pro-B cell	3 studies	26% ± 2%	Explore
type I pneumocyte	3 studies	25% ± 5%	Explore
retina horizontal cell	3 studies	26% ± 4%	Explore
erythroblast	3 studies	29% ± 16%	Explore
dendritic cell	3 studies	34% ± 18%	Explore
GABAergic neuron	3 studies	31% ± 12%	Explore
oligodendrocyte precursor cell	3 studies	29% ± 10%	Explore
group 3 innate lymphoid cell	3 studies	34% ± 16%	Explore
goblet cell	3 studies	21% ± 4%	Explore
enteroendocrine cell	3 studies	26% ± 10%	Explore
CD4-positive, alpha-beta memory T cell	3 studies	29% ± 2%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
lung	8 studies	22% ± 7%	Explore
brain	6 studies	22% ± 9%	Explore
peripheral blood	4 studies	22% ± 6%	Explore
eye	4 studies	19% ± 3%	Explore
intestine	4 studies	20% ± 5%	Explore
pancreas	3 studies	29% ± 8%	Explore
kidney	3 studies	19% ± 1%	Explore
prostate	3 studies	19% ± 4%	Explore
liver	3 studies	31% ± 13%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
ovary	100%	7801.23	180 / 180	100%	128.46	430 / 430
skin	100%	7365.42	1808 / 1809	100%	188.41	472 / 472
esophagus	100%	6787.76	1444 / 1445	100%	127.81	183 / 183
prostate	100%	6317.07	245 / 245	100%	122.59	501 / 502
uterus	100%	7393.13	170 / 170	100%	159.81	458 / 459
lung	100%	7114.37	576 / 578	100%	147.44	1154 / 1155
intestine	100%	6445.23	966 / 966	99%	135.40	524 / 527
breast	100%	5175.63	459 / 459	99%	156.82	1111 / 1118
thymus	100%	6219.86	653 / 653	99%	89.57	601 / 605
brain	99%	7055.81	2624 / 2642	100%	113.50	705 / 705
stomach	100%	5222.09	359 / 359	99%	129.41	284 / 286
bladder	100%	8295.29	21 / 21	99%	148.14	499 / 504
adrenal gland	100%	11990.21	258 / 258	99%	116.61	227 / 230
kidney	100%	5902.45	89 / 89	98%	68.44	887 / 901
pancreas	98%	2914.78	321 / 328	99%	99.43	176 / 178
liver	96%	3664.25	218 / 226	97%	77.79	394 / 406
eye	0%	0	0 / 0	100%	161.19	80 / 80
lymph node	0%	0	0 / 0	100%	162.19	29 / 29
muscle	100%	8156.68	803 / 803	0%	0	0 / 0
spleen	100%	6603.90	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	144.42	45 / 45
ureter	0%	0	0 / 0	100%	72.58	1 / 1
blood vessel	100%	5387.01	1334 / 1335	0%	0	0 / 0
adipose	100%	5789.60	1203 / 1204	0%	0	0 / 0
heart	97%	6113.90	838 / 861	0%	0	0 / 0
peripheral blood	94%	6337.12	871 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0