I. Expression across cell types
Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| epithelial cell | 3 studies | 29% ± 11% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| epithelial cell | 3 studies | 29% ± 11% |
Insufficient scRNA-seq data for expression of CHERP at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| esophagus | 100% | 2198.34 | 1445 / 1445 | 100% | 39.90 | 183 / 183 |
| ovary | 100% | 2975.14 | 180 / 180 | 100% | 49.53 | 430 / 430 |
| stomach | 100% | 1830.18 | 359 / 359 | 100% | 31.55 | 286 / 286 |
| intestine | 100% | 2438.38 | 966 / 966 | 99% | 25.46 | 523 / 527 |
| skin | 100% | 2493.80 | 1809 / 1809 | 99% | 26.15 | 468 / 472 |
| pancreas | 100% | 1329.42 | 328 / 328 | 98% | 13.43 | 175 / 178 |
| breast | 100% | 2450.31 | 459 / 459 | 98% | 19.98 | 1095 / 1118 |
| brain | 99% | 1705.38 | 2604 / 2642 | 99% | 25.84 | 699 / 705 |
| prostate | 100% | 2491.18 | 245 / 245 | 97% | 19.34 | 488 / 502 |
| lung | 100% | 1943.54 | 577 / 578 | 97% | 19.61 | 1121 / 1155 |
| thymus | 100% | 2583.11 | 653 / 653 | 97% | 15.51 | 585 / 605 |
| bladder | 100% | 2537.48 | 21 / 21 | 97% | 18.28 | 487 / 504 |
| uterus | 100% | 2762.91 | 170 / 170 | 96% | 19.22 | 441 / 459 |
| kidney | 100% | 1698.47 | 89 / 89 | 95% | 12.48 | 856 / 901 |
| adrenal gland | 100% | 2113.81 | 258 / 258 | 92% | 13.34 | 211 / 230 |
| liver | 100% | 1509.40 | 226 / 226 | 89% | 11.53 | 360 / 406 |
| adipose | 100% | 2144.05 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 2138.42 | 1335 / 1335 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 19.14 | 29 / 29 |
| muscle | 100% | 2444.60 | 803 / 803 | 0% | 0 | 0 / 0 |
| spleen | 100% | 2433.21 | 241 / 241 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 100% | 6.73 | 1 / 1 |
| eye | 0% | 0 | 0 / 0 | 99% | 20.70 | 79 / 80 |
| heart | 98% | 1274.79 | 848 / 861 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 98% | 20.31 | 44 / 45 |
| peripheral blood | 89% | 1453.45 | 825 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0070886 | Biological process | positive regulation of calcineurin-NFAT signaling cascade |
| GO_0008285 | Biological process | negative regulation of cell population proliferation |
| GO_0006874 | Biological process | intracellular calcium ion homeostasis |
| GO_0051209 | Biological process | release of sequestered calcium ion into cytosol |
| GO_0007399 | Biological process | nervous system development |
| GO_0006396 | Biological process | RNA processing |
| GO_0033017 | Cellular component | sarcoplasmic reticulum membrane |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0005654 | Cellular component | nucleoplasm |
| GO_0048471 | Cellular component | perinuclear region of cytoplasm |
| GO_0016020 | Cellular component | membrane |
| GO_0044325 | Molecular function | transmembrane transporter binding |
| GO_0005515 | Molecular function | protein binding |
| GO_0003723 | Molecular function | RNA binding |
| Gene name | CHERP |
| Protein name | Calcium homeostasis endoplasmic reticulum protein Calcium homeostasis endoplasmic reticulum protein (ERPROT 213-21) (SR-related CTD-associated factor 6) |
| Synonyms | DAN26 SCAF6 |
| Description | FUNCTION: Involved in calcium homeostasis, growth and proliferation. . |
| Accessions | Q8IWX8 ENST00000546361.7 ENST00000198939.6 J3QK89 |
