Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 3 studies | 25% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
liver | 100% | 1968.74 | 226 / 226 | 100% | 41.25 | 406 / 406 |
ovary | 100% | 1319.77 | 180 / 180 | 100% | 59.74 | 430 / 430 |
brain | 100% | 2160.90 | 2641 / 2642 | 100% | 74.98 | 705 / 705 |
thymus | 100% | 2039.28 | 653 / 653 | 100% | 86.50 | 604 / 605 |
pancreas | 100% | 809.94 | 327 / 328 | 100% | 36.09 | 178 / 178 |
kidney | 100% | 2271.88 | 89 / 89 | 99% | 45.16 | 896 / 901 |
prostate | 100% | 2249.00 | 245 / 245 | 99% | 89.81 | 499 / 502 |
adrenal gland | 100% | 2600.31 | 258 / 258 | 99% | 53.04 | 228 / 230 |
uterus | 100% | 1473.42 | 170 / 170 | 99% | 43.47 | 455 / 459 |
breast | 100% | 1364.04 | 459 / 459 | 99% | 69.52 | 1107 / 1118 |
esophagus | 100% | 1284.70 | 1443 / 1445 | 99% | 20.77 | 181 / 183 |
skin | 100% | 1454.37 | 1807 / 1809 | 99% | 38.23 | 466 / 472 |
intestine | 100% | 1519.66 | 966 / 966 | 98% | 49.51 | 518 / 527 |
bladder | 100% | 1364.29 | 21 / 21 | 98% | 45.06 | 495 / 504 |
stomach | 100% | 1384.50 | 359 / 359 | 98% | 40.00 | 280 / 286 |
lung | 99% | 1114.47 | 570 / 578 | 99% | 43.90 | 1144 / 1155 |
lymph node | 0% | 0 | 0 / 0 | 100% | 61.98 | 29 / 29 |
spleen | 100% | 2084.27 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 33.02 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 36.55 | 1 / 1 |
adipose | 99% | 1096.97 | 1197 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 1007.59 | 1325 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 1907.56 | 852 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 34.23 | 79 / 80 |
peripheral blood | 97% | 1290.07 | 905 / 929 | 0% | 0 | 0 / 0 |
muscle | 89% | 627.37 | 718 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_2001033 | Biological process | negative regulation of double-strand break repair via nonhomologous end joining |
GO_0006402 | Biological process | mRNA catabolic process |
GO_0016077 | Biological process | sno(s)RNA catabolic process |
GO_0005634 | Cellular component | nucleus |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0030515 | Molecular function | snoRNA binding |
GO_1990174 | Molecular function | phosphodiesterase decapping endonuclease activity |
GO_0140933 | Molecular function | 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | NUDT16L1 |
Protein name | Nudix hydrolase 16 like 1 Nudix (Nucleoside diphosphate linked moiety X)-type motif 16-like 1, isoform CRA_b (Nudix hydrolase 16 like 1) Tudor-interacting repair regulator protein (NUDT16-like protein 1) (Protein syndesmos) Alternative protein NUDT16L1 |
Synonyms | hCG_15176 SDOS TIRR |
Description | FUNCTION: Key regulator of TP53BP1 required to stabilize TP53BP1 and regulate its recruitment to chromatin . In absence of DNA damage, interacts with the tandem Tudor-like domain of TP53BP1, masking the region that binds histone H4 dimethylated at 'Lys-20' (H4K20me2), thereby preventing TP53BP1 recruitment to chromatin and maintaining TP53BP1 localization to the nucleus . Following DNA damage, ATM-induced phosphorylation of TP53BP1 and subsequent recruitment of RIF1 leads to dissociate NUDT16L1/TIRR from TP53BP1, unmasking the tandem Tudor-like domain and allowing recruitment of TP53BP1 to DNA double strand breaks (DSBs) . Binds U8 snoRNA . . |
Accessions | K7ENA3 ENST00000405142.1 [Q9BRJ7-2] L8EAI7 ENST00000586536.1 W4VSQ8 ENST00000590460.1 ENST00000304301.11 [Q9BRJ7-1] ENST00000586252.1 K7EIN2 Q9BRJ7 |