Name | Number of supported studies | Average coverage | |
---|---|---|---|
macrophage | 29 studies | 35% ± 11% | |
classical monocyte | 22 studies | 31% ± 12% | |
non-classical monocyte | 18 studies | 33% ± 11% | |
monocyte | 17 studies | 35% ± 11% | |
natural killer cell | 16 studies | 22% ± 7% | |
conventional dendritic cell | 16 studies | 28% ± 8% | |
mast cell | 12 studies | 22% ± 5% | |
dendritic cell | 11 studies | 29% ± 13% | |
neutrophil | 10 studies | 33% ± 12% | |
myeloid cell | 10 studies | 37% ± 11% | |
epithelial cell | 8 studies | 29% ± 15% | |
alveolar macrophage | 7 studies | 28% ± 3% | |
CD16-negative, CD56-bright natural killer cell, human | 7 studies | 23% ± 5% | |
innate lymphoid cell | 7 studies | 25% ± 6% | |
respiratory goblet cell | 6 studies | 24% ± 9% | |
secretory cell | 6 studies | 28% ± 11% | |
basal cell | 6 studies | 32% ± 10% | |
abnormal cell | 5 studies | 35% ± 19% | |
leukocyte | 5 studies | 20% ± 2% | |
microglial cell | 5 studies | 34% ± 14% | |
ciliated cell | 5 studies | 29% ± 6% | |
squamous epithelial cell | 4 studies | 44% ± 22% | |
retinal ganglion cell | 4 studies | 78% ± 21% | |
retina horizontal cell | 4 studies | 27% ± 7% | |
endothelial cell | 4 studies | 17% ± 1% | |
mononuclear phagocyte | 4 studies | 30% ± 7% | |
gamma-delta T cell | 4 studies | 23% ± 4% | |
inflammatory macrophage | 4 studies | 22% ± 7% | |
fibroblast | 4 studies | 22% ± 4% | |
club cell | 3 studies | 21% ± 5% | |
mature NK T cell | 3 studies | 18% ± 1% | |
extravillous trophoblast | 3 studies | 82% ± 10% | |
T cell | 3 studies | 17% ± 0% | |
retinal pigment epithelial cell | 3 studies | 58% ± 11% | |
tissue-resident macrophage | 3 studies | 29% ± 12% | |
group 3 innate lymphoid cell | 3 studies | 39% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 99% | 4175.74 | 574 / 578 | 96% | 43.64 | 1110 / 1155 |
bladder | 95% | 2232.24 | 20 / 21 | 93% | 43.67 | 471 / 504 |
intestine | 89% | 1866.73 | 858 / 966 | 97% | 36.88 | 510 / 527 |
esophagus | 93% | 2129.67 | 1347 / 1445 | 92% | 22.68 | 168 / 183 |
kidney | 88% | 2754.75 | 78 / 89 | 89% | 59.46 | 802 / 901 |
uterus | 76% | 1114.52 | 130 / 170 | 93% | 45.68 | 429 / 459 |
thymus | 93% | 2820.78 | 607 / 653 | 67% | 11.43 | 408 / 605 |
stomach | 68% | 1165.77 | 245 / 359 | 92% | 27.65 | 262 / 286 |
breast | 73% | 1233.08 | 336 / 459 | 68% | 13.07 | 758 / 1118 |
skin | 45% | 5787.51 | 814 / 1809 | 74% | 24.38 | 347 / 472 |
ovary | 38% | 543.07 | 68 / 180 | 80% | 18.09 | 343 / 430 |
adrenal gland | 81% | 1181.06 | 209 / 258 | 31% | 11.23 | 72 / 230 |
pancreas | 7% | 97.82 | 23 / 328 | 94% | 51.58 | 168 / 178 |
peripheral blood | 100% | 24819.27 | 929 / 929 | 0% | 0 | 0 / 0 |
spleen | 100% | 4909.23 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 30.59 | 44 / 45 |
prostate | 88% | 1710.61 | 216 / 245 | 9% | 0.88 | 43 / 502 |
lymph node | 0% | 0 | 0 / 0 | 90% | 20.91 | 26 / 29 |
muscle | 89% | 8592.50 | 717 / 803 | 0% | 0 | 0 / 0 |
adipose | 87% | 2056.63 | 1049 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 78% | 1883.55 | 1039 / 1335 | 0% | 0 | 0 / 0 |
heart | 58% | 1058.79 | 501 / 861 | 0% | 0 | 0 / 0 |
brain | 20% | 326.81 | 532 / 2642 | 38% | 7.84 | 266 / 705 |
liver | 18% | 321.83 | 41 / 226 | 22% | 6.25 | 89 / 406 |
eye | 0% | 0 | 0 / 0 | 35% | 4.75 | 28 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0015718 | Biological process | monocarboxylic acid transport |
GO_0042867 | Biological process | pyruvate catabolic process |
GO_1901475 | Biological process | pyruvate transmembrane transport |
GO_0035873 | Biological process | lactate transmembrane transport |
GO_0016323 | Cellular component | basolateral plasma membrane |
GO_0016328 | Cellular component | lateral plasma membrane |
GO_0016324 | Cellular component | apical plasma membrane |
GO_0031965 | Cellular component | nuclear membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0015650 | Molecular function | lactate:proton symporter activity |
GO_0050833 | Molecular function | pyruvate transmembrane transporter activity |
GO_0008028 | Molecular function | monocarboxylic acid transmembrane transporter activity |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | SLC16A3 |
Protein name | Solute carrier family 16 member 3 Monocarboxylate transporter 4 Monocarboxylate transporter 4 (MCT 4) (Solute carrier family 16 member 3) |
Synonyms | MCT4 MCT3 |
Description | FUNCTION: Proton-dependent transporter of monocarboxylates such as L-lactate and pyruvate . Plays a predominant role in L-lactate efflux from highly glycolytic cells (By similarity). . |
Accessions | ENST00000583025.1 ENST00000584689 ENST00000580189.6 O15427 ENST00000582715.1 J3QQV2 ENST00000580189 J3QSC3 ENST00000581287.5 ENST00000578684.6 ENST00000584689.6 ENST00000582743.6 J3KTM6 ENST00000617373.5 ENST00000392341.6 J3QQS9 ENST00000577650.6 ENST00000580098.6 ENST00000392339.6 J3QRA0 J3KTI8 J3QRP8 ENST00000619321.2 |