Insufficient scRNA-seq data for expression of GPKOW at single-cell level.
Insufficient scRNA-seq data for expression of GPKOW at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1236.75 | 1445 / 1445 | 100% | 33.76 | 183 / 183 |
brain | 100% | 1376.07 | 2641 / 2642 | 100% | 104.23 | 705 / 705 |
skin | 100% | 1436.45 | 1809 / 1809 | 100% | 59.51 | 471 / 472 |
uterus | 100% | 1346.34 | 170 / 170 | 100% | 66.78 | 458 / 459 |
ovary | 100% | 1065.42 | 180 / 180 | 100% | 45.30 | 429 / 430 |
thymus | 100% | 1175.20 | 653 / 653 | 100% | 58.13 | 603 / 605 |
lung | 100% | 1156.17 | 577 / 578 | 100% | 48.77 | 1153 / 1155 |
stomach | 100% | 995.29 | 359 / 359 | 100% | 50.80 | 285 / 286 |
intestine | 100% | 1294.20 | 966 / 966 | 100% | 57.21 | 525 / 527 |
breast | 100% | 1368.97 | 459 / 459 | 99% | 58.95 | 1110 / 1118 |
kidney | 100% | 1014.81 | 89 / 89 | 99% | 40.70 | 894 / 901 |
prostate | 100% | 1098.20 | 245 / 245 | 99% | 52.10 | 498 / 502 |
liver | 100% | 631.35 | 225 / 226 | 100% | 44.49 | 404 / 406 |
bladder | 100% | 1299.95 | 21 / 21 | 99% | 59.59 | 499 / 504 |
pancreas | 99% | 542.25 | 324 / 328 | 100% | 53.86 | 178 / 178 |
adrenal gland | 100% | 1235.50 | 258 / 258 | 98% | 51.48 | 225 / 230 |
adipose | 100% | 1332.19 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1492.12 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 39.93 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 67.43 | 29 / 29 |
muscle | 100% | 1580.57 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1229.82 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 66.10 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 34.24 | 1 / 1 |
peripheral blood | 99% | 1038.99 | 919 / 929 | 0% | 0 | 0 / 0 |
heart | 99% | 922.70 | 851 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0000398 | Biological process | mRNA splicing, via spliceosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005681 | Cellular component | spliceosomal complex |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | GPKOW |
Protein name | G-patch domain and KOW motifs-containing protein (G-patch domain-containing protein 5) (Protein MOS2 homolog) (Protein T54) |
Synonyms | GPATCH5 T54 GPATC5 |
Description | FUNCTION: RNA-binding protein involved in pre-mRNA splicing. As a component of the minor spliceosome, involved in the splicing of U12-type introns in pre-mRNAs (Probable). . |
Accessions | ENST00000710028.1 ENST00000156109.7 Q92917 |