Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 7 studies | 21% ± 4% | |
fibroblast | 6 studies | 19% ± 4% | |
natural killer cell | 5 studies | 18% ± 3% | |
B cell | 5 studies | 22% ± 5% | |
CD8-positive, alpha-beta T cell | 5 studies | 20% ± 4% | |
CD8-positive, alpha-beta memory T cell | 5 studies | 19% ± 5% | |
CD16-positive, CD56-dim natural killer cell, human | 4 studies | 18% ± 1% | |
classical monocyte | 4 studies | 22% ± 6% | |
epithelial cell | 4 studies | 35% ± 10% | |
ciliated cell | 4 studies | 26% ± 7% | |
CD4-positive, alpha-beta T cell | 3 studies | 22% ± 4% | |
effector memory CD8-positive, alpha-beta T cell | 3 studies | 22% ± 5% | |
naive thymus-derived CD4-positive, alpha-beta T cell | 3 studies | 20% ± 3% | |
non-classical monocyte | 3 studies | 22% ± 4% | |
GABAergic neuron | 3 studies | 18% ± 2% | |
glutamatergic neuron | 3 studies | 23% ± 6% | |
dendritic cell | 3 studies | 28% ± 7% | |
gamma-delta T cell | 3 studies | 25% ± 14% | |
naive B cell | 3 studies | 18% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 1004.20 | 2642 / 2642 | 100% | 9.91 | 705 / 705 |
thymus | 100% | 932.57 | 653 / 653 | 100% | 8.67 | 604 / 605 |
uterus | 100% | 1166.19 | 170 / 170 | 100% | 8.37 | 458 / 459 |
lung | 100% | 888.26 | 578 / 578 | 100% | 6.90 | 1152 / 1155 |
prostate | 100% | 942.37 | 245 / 245 | 100% | 8.00 | 500 / 502 |
breast | 100% | 1055.71 | 459 / 459 | 100% | 9.58 | 1113 / 1118 |
liver | 100% | 539.47 | 226 / 226 | 100% | 6.12 | 404 / 406 |
adrenal gland | 100% | 1068.99 | 258 / 258 | 99% | 10.61 | 228 / 230 |
pancreas | 99% | 482.33 | 326 / 328 | 99% | 6.63 | 177 / 178 |
bladder | 100% | 1022.95 | 21 / 21 | 99% | 7.25 | 497 / 504 |
esophagus | 100% | 831.40 | 1445 / 1445 | 98% | 5.00 | 180 / 183 |
kidney | 100% | 794.22 | 89 / 89 | 98% | 6.04 | 885 / 901 |
ovary | 100% | 1345.05 | 180 / 180 | 98% | 4.92 | 422 / 430 |
stomach | 100% | 645.75 | 359 / 359 | 98% | 6.29 | 279 / 286 |
intestine | 100% | 943.50 | 966 / 966 | 97% | 7.12 | 513 / 527 |
skin | 100% | 943.72 | 1808 / 1809 | 96% | 8.15 | 453 / 472 |
adipose | 100% | 1010.24 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 922.77 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 10.65 | 29 / 29 |
spleen | 100% | 1035.95 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 7.06 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.53 | 1 / 1 |
muscle | 100% | 855.32 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 599.41 | 853 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 97% | 792.20 | 903 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 75% | 3.89 | 60 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0033077 | Biological process | T cell differentiation in thymus |
GO_0030851 | Biological process | granulocyte differentiation |
GO_0046638 | Biological process | positive regulation of alpha-beta T cell differentiation |
GO_0007219 | Biological process | Notch signaling pathway |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0035019 | Biological process | somatic stem cell population maintenance |
GO_0045892 | Biological process | negative regulation of DNA-templated transcription |
GO_0071425 | Biological process | hematopoietic stem cell proliferation |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005634 | Cellular component | nucleus |
GO_0031490 | Molecular function | chromatin DNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0003729 | Molecular function | mRNA binding |
GO_0003682 | Molecular function | chromatin binding |
GO_0060090 | Molecular function | molecular adaptor activity |
GO_0003723 | Molecular function | RNA binding |
Gene name | NKAP |
Protein name | NKAP protein NFKB activating protein NF-kappa-B-activating protein |
Synonyms | |
Description | FUNCTION: Acts as a transcriptional repressor . Plays a role as a transcriptional corepressor of the Notch-mediated signaling required for T-cell development . Also involved in the TNF and IL-1 induced NF-kappa-B activation. Associates with chromatin at the Notch-regulated SKP2 promoter. . |
Accessions | A0PJ73 Q05D22 ENST00000371410.5 A0A494C050 Q8N5F7 ENST00000652253.1 |