Insufficient scRNA-seq data for expression of DBR1 at single-cell level.
Insufficient scRNA-seq data for expression of DBR1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 868.85 | 180 / 180 | 100% | 22.17 | 430 / 430 |
breast | 100% | 870.13 | 459 / 459 | 100% | 24.62 | 1117 / 1118 |
esophagus | 100% | 816.11 | 1442 / 1445 | 100% | 26.62 | 183 / 183 |
uterus | 100% | 907.02 | 170 / 170 | 100% | 25.66 | 457 / 459 |
brain | 100% | 528.07 | 2635 / 2642 | 100% | 21.90 | 703 / 705 |
bladder | 100% | 787.14 | 21 / 21 | 99% | 19.21 | 501 / 504 |
prostate | 100% | 738.48 | 245 / 245 | 99% | 18.31 | 499 / 502 |
lung | 99% | 764.79 | 574 / 578 | 100% | 23.26 | 1155 / 1155 |
stomach | 100% | 803.99 | 359 / 359 | 99% | 24.95 | 284 / 286 |
intestine | 100% | 853.82 | 966 / 966 | 99% | 19.51 | 523 / 527 |
pancreas | 100% | 530.87 | 327 / 328 | 99% | 16.42 | 176 / 178 |
kidney | 100% | 636.27 | 89 / 89 | 99% | 16.39 | 888 / 901 |
thymus | 100% | 930.28 | 653 / 653 | 99% | 17.09 | 596 / 605 |
skin | 100% | 918.21 | 1809 / 1809 | 97% | 18.99 | 457 / 472 |
adrenal gland | 100% | 846.46 | 258 / 258 | 93% | 11.35 | 215 / 230 |
liver | 100% | 412.10 | 226 / 226 | 88% | 9.05 | 357 / 406 |
adipose | 100% | 822.02 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 16.23 | 29 / 29 |
spleen | 100% | 1229.71 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 29.38 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 8.18 | 1 / 1 |
blood vessel | 100% | 700.94 | 1333 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 464.63 | 794 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 442.25 | 840 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 75% | 6.46 | 60 / 80 |
peripheral blood | 73% | 470.49 | 682 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0000398 | Biological process | mRNA splicing, via spliceosome |
GO_0000375 | Biological process | RNA splicing, via transesterification reactions |
GO_0000292 | Biological process | RNA fragment catabolic process |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0008419 | Molecular function | RNA lariat debranching enzyme activity |
GO_0046872 | Molecular function | metal ion binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | DBR1 |
Protein name | Debranching RNA lariats 1 Lariat debranching enzyme (EC 3.1.4.-) |
Synonyms | |
Description | FUNCTION: Cleaves the 2'-5' phosphodiester linkage at the branch point of excised lariat intron RNA and converts them into linear molecules that can be subsequently degraded, thereby facilitating ribonucleotide turnover . Linked to its role in pre-mRNA processing mechanism, may also participate in retrovirus replication via an RNA lariat intermediate in cDNA synthesis and have an antiviral cell-intrinsic defense function in the brainstem . . |
Accessions | ENST00000477557.3 A0A8V8TMF7 ENST00000698925.1 A0A8V8TP85 A0A8V8TMH0 ENST00000698922.1 ENST00000260803.9 [Q9UK59-1] F8WAY1 A0A8V8TMX5 ENST00000698923.1 A0A8V8TNX0 Q9UK59 ENST00000698924.1 ENST00000698926.1 |