Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| endothelial cell | 5 studies | 23% ± 6% | |
| epithelial cell | 3 studies | 32% ± 5% | |
| GABAergic neuron | 3 studies | 39% ± 8% | |
| glutamatergic neuron | 3 studies | 46% ± 12% | |
| oligodendrocyte precursor cell | 3 studies | 26% ± 6% | |
| respiratory goblet cell | 3 studies | 22% ± 5% | |
| transit amplifying cell | 3 studies | 25% ± 13% | |
| astrocyte | 3 studies | 23% ± 0% | |
| oligodendrocyte | 3 studies | 22% ± 1% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 4 studies | 33% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| esophagus | 100% | 3091.34 | 1445 / 1445 | 100% | 19.53 | 183 / 183 |
| skin | 100% | 3865.45 | 1808 / 1809 | 100% | 23.77 | 470 / 472 |
| prostate | 100% | 5113.95 | 245 / 245 | 99% | 17.14 | 498 / 502 |
| intestine | 100% | 2006.69 | 964 / 966 | 99% | 14.78 | 522 / 527 |
| breast | 100% | 2581.64 | 459 / 459 | 99% | 15.38 | 1105 / 1118 |
| lung | 99% | 1948.91 | 575 / 578 | 99% | 16.17 | 1145 / 1155 |
| stomach | 99% | 1746.99 | 357 / 359 | 99% | 15.37 | 283 / 286 |
| uterus | 100% | 5225.70 | 170 / 170 | 98% | 15.85 | 450 / 459 |
| bladder | 100% | 4311.10 | 21 / 21 | 98% | 13.41 | 493 / 504 |
| thymus | 100% | 2096.06 | 653 / 653 | 98% | 10.76 | 591 / 605 |
| brain | 98% | 1670.79 | 2579 / 2642 | 100% | 19.04 | 705 / 705 |
| ovary | 100% | 3629.36 | 180 / 180 | 96% | 11.73 | 412 / 430 |
| pancreas | 99% | 1649.16 | 325 / 328 | 97% | 9.21 | 172 / 178 |
| adrenal gland | 100% | 3476.36 | 258 / 258 | 85% | 7.44 | 195 / 230 |
| kidney | 96% | 1206.28 | 85 / 89 | 88% | 7.45 | 792 / 901 |
| liver | 99% | 1322.66 | 224 / 226 | 76% | 5.34 | 307 / 406 |
| adipose | 100% | 2423.87 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 100% | 35.90 | 80 / 80 |
| spleen | 100% | 1670.48 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 18.69 | 45 / 45 |
| muscle | 100% | 2573.81 | 802 / 803 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 2925.17 | 1332 / 1335 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 97% | 10.98 | 28 / 29 |
| heart | 95% | 1874.97 | 817 / 861 | 0% | 0 | 0 / 0 |
| peripheral blood | 34% | 1030.78 | 316 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0000463 | Biological process | maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
| GO_0000466 | Biological process | maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
| GO_0008150 | Biological process | biological_process |
| GO_0005730 | Cellular component | nucleolus |
| GO_0001650 | Cellular component | fibrillar center |
| GO_0003723 | Molecular function | RNA binding |
| Gene name | URB1 |
| Protein name | Nucleolar pre-ribosomal-associated protein 1 (Nucleolar protein 254 kDa) (URB1 ribosome biogenesis 1 homolog) |
| Synonyms | NPA1 NOP254 KIAA0539 C21orf108 |
| Description | |
| Accessions | O60287 ENST00000382751.4 |