RPS19 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
B cell	50 studies	92% ± 17%	Explore
macrophage	44 studies	82% ± 23%	Explore
natural killer cell	44 studies	92% ± 15%	Explore
endothelial cell	44 studies	76% ± 28%	Explore
T cell	42 studies	85% ± 23%	Explore
fibroblast	42 studies	81% ± 28%	Explore
CD8-positive, alpha-beta T cell	38 studies	94% ± 12%	Explore
pericyte	37 studies	80% ± 27%	Explore
CD4-positive, alpha-beta T cell	36 studies	93% ± 15%	Explore
conventional dendritic cell	31 studies	97% ± 6%	Explore
plasmacytoid dendritic cell	31 studies	96% ± 7%	Explore
smooth muscle cell	30 studies	82% ± 26%	Explore
dendritic cell	28 studies	90% ± 17%	Explore
plasma cell	28 studies	86% ± 22%	Explore
epithelial cell	27 studies	82% ± 26%	Explore
monocyte	26 studies	84% ± 22%	Explore
endothelial cell of lymphatic vessel	26 studies	85% ± 23%	Explore
classical monocyte	26 studies	90% ± 14%	Explore
regulatory T cell	26 studies	96% ± 8%	Explore
non-classical monocyte	25 studies	96% ± 8%	Explore
mature NK T cell	24 studies	91% ± 14%	Explore
mast cell	23 studies	85% ± 16%	Explore
basal cell	22 studies	88% ± 21%	Explore
gamma-delta T cell	21 studies	96% ± 5%	Explore
memory B cell	21 studies	98% ± 3%	Explore
connective tissue cell	19 studies	91% ± 17%	Explore
naive B cell	18 studies	98% ± 5%	Explore
ciliated cell	17 studies	81% ± 19%	Explore
mucosal invariant T cell	17 studies	96% ± 9%	Explore
capillary endothelial cell	17 studies	75% ± 18%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	16 studies	96% ± 10%	Explore
endothelial cell of artery	16 studies	85% ± 13%	Explore
CD16-negative, CD56-bright natural killer cell, human	15 studies	92% ± 14%	Explore
CD16-positive, CD56-dim natural killer cell, human	15 studies	94% ± 10%	Explore
microglial cell	15 studies	58% ± 27%	Explore
vein endothelial cell	15 studies	84% ± 22%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	14 studies	98% ± 5%	Explore
myofibroblast cell	14 studies	91% ± 15%	Explore
myeloid cell	14 studies	86% ± 21%	Explore
CD8-positive, alpha-beta memory T cell	13 studies	94% ± 11%	Explore
neutrophil	13 studies	64% ± 28%	Explore
erythrocyte	13 studies	68% ± 25%	Explore
mesothelial cell	13 studies	81% ± 23%	Explore
effector memory CD8-positive, alpha-beta T cell	12 studies	90% ± 18%	Explore
innate lymphoid cell	12 studies	98% ± 3%	Explore
plasmablast	12 studies	97% ± 4%	Explore
CD4-positive, alpha-beta memory T cell	12 studies	94% ± 9%	Explore
secretory cell	12 studies	92% ± 11%	Explore
endothelial cell of vascular tree	12 studies	86% ± 23%	Explore
leukocyte	11 studies	87% ± 17%	Explore
goblet cell	11 studies	86% ± 14%	Explore
type I pneumocyte	10 studies	73% ± 26%	Explore
type II pneumocyte	10 studies	79% ± 26%	Explore
T follicular helper cell	10 studies	99% ± 1%	Explore
astrocyte	10 studies	40% ± 20%	Explore
progenitor cell	10 studies	92% ± 15%	Explore
IgG plasma cell	10 studies	87% ± 15%	Explore
club cell	9 studies	84% ± 24%	Explore
IgA plasma cell	9 studies	85% ± 19%	Explore
hematopoietic stem cell	9 studies	92% ± 20%	Explore
platelet	8 studies	60% ± 24%	Explore
abnormal cell	8 studies	86% ± 24%	Explore
neuron	8 studies	75% ± 20%	Explore
oligodendrocyte precursor cell	8 studies	36% ± 25%	Explore
enterocyte	8 studies	78% ± 20%	Explore
alveolar macrophage	7 studies	81% ± 26%	Explore
respiratory goblet cell	7 studies	84% ± 15%	Explore
mononuclear phagocyte	7 studies	88% ± 22%	Explore
glutamatergic neuron	7 studies	33% ± 20%	Explore
epithelial cell of proximal tubule	7 studies	77% ± 23%	Explore
oligodendrocyte	7 studies	29% ± 13%	Explore
enteroendocrine cell	7 studies	86% ± 20%	Explore
transit amplifying cell	7 studies	80% ± 29%	Explore
retinal rod cell	7 studies	52% ± 25%	Explore
hematopoietic precursor cell	6 studies	83% ± 29%	Explore
ionocyte	6 studies	85% ± 18%	Explore
kidney loop of Henle epithelial cell	6 studies	78% ± 23%	Explore
renal alpha-intercalated cell	6 studies	98% ± 2%	Explore
erythroblast	6 studies	77% ± 22%	Explore
intestinal crypt stem cell	6 studies	78% ± 31%	Explore
amacrine cell	6 studies	49% ± 23%	Explore
retinal ganglion cell	6 studies	59% ± 26%	Explore
precursor B cell	6 studies	99% ± 2%	Explore
brush cell	6 studies	88% ± 12%	Explore
glial cell	6 studies	69% ± 25%	Explore
immature B cell	6 studies	99% ± 1%	Explore
effector memory CD4-positive, alpha-beta T cell	6 studies	98% ± 3%	Explore
effector CD8-positive, alpha-beta T cell	6 studies	94% ± 13%	Explore
CD4-positive helper T cell	5 studies	97% ± 2%	Explore
central memory CD8-positive, alpha-beta T cell	5 studies	98% ± 3%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	5 studies	96% ± 4%	Explore
kidney distal convoluted tubule epithelial cell	5 studies	95% ± 4%	Explore
megakaryocyte	5 studies	82% ± 19%	Explore
OFF-bipolar cell	5 studies	62% ± 28%	Explore
ON-bipolar cell	5 studies	60% ± 27%	Explore
retinal cone cell	5 studies	60% ± 28%	Explore
lymphocyte	5 studies	87% ± 23%	Explore
T-helper 17 cell	5 studies	99% ± 1%	Explore
group 3 innate lymphoid cell	5 studies	98% ± 1%	Explore
Mueller cell	5 studies	59% ± 19%	Explore
double negative thymocyte	5 studies	98% ± 2%	Explore
effector CD4-positive, alpha-beta T cell	5 studies	99% ± 2%	Explore
granulocyte	5 studies	94% ± 6%	Explore
intermediate monocyte	5 studies	91% ± 8%	Explore
melanocyte	5 studies	72% ± 28%	Explore
CD4-positive, alpha-beta cytotoxic T cell	4 studies	88% ± 17%	Explore
deuterosomal cell	4 studies	83% ± 18%	Explore
duct epithelial cell	4 studies	97% ± 1%	Explore
exhausted T cell	4 studies	97% ± 4%	Explore
precursor cell	4 studies	85% ± 23%	Explore
pancreatic A cell	4 studies	82% ± 17%	Explore
type B pancreatic cell	4 studies	82% ± 15%	Explore
cholangiocyte	4 studies	43% ± 31%	Explore
endothelial cell of sinusoid	4 studies	46% ± 30%	Explore
glomerular endothelial cell	4 studies	85% ± 12%	Explore
kidney connecting tubule epithelial cell	4 studies	93% ± 5%	Explore
podocyte	4 studies	87% ± 10%	Explore
paneth cell	4 studies	88% ± 11%	Explore
GABAergic neuron	4 studies	44% ± 16%	Explore
GABAergic amacrine cell	4 studies	48% ± 18%	Explore
glycinergic amacrine cell	4 studies	48% ± 18%	Explore
pro-B cell	4 studies	98% ± 1%	Explore
neuroendocrine cell	4 studies	94% ± 4%	Explore
chondrocyte	4 studies	72% ± 25%	Explore
adventitial cell	4 studies	88% ± 14%	Explore
mucus secreting cell	4 studies	78% ± 31%	Explore
retina horizontal cell	4 studies	53% ± 17%	Explore
inflammatory macrophage	4 studies	84% ± 15%	Explore
acinar cell	4 studies	76% ± 23%	Explore
muscle cell	4 studies	58% ± 20%	Explore
germinal center B cell	4 studies	99% ± 1%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	97% ± 5%	Explore
adipocyte	4 studies	27% ± 11%	Explore
hepatocyte	4 studies	70% ± 28%	Explore
IgM plasma cell	4 studies	94% ± 6%	Explore
interneuron	4 studies	58% ± 24%	Explore
T-helper 1 cell	4 studies	100% ± 0%	Explore
squamous epithelial cell	3 studies	69% ± 16%	Explore
pancreatic D cell	3 studies	88% ± 12%	Explore
hepatic stellate cell	3 studies	34% ± 22%	Explore
renal beta-intercalated cell	3 studies	99% ± 1%	Explore
neural crest cell	3 studies	100% ± 0%	Explore
retinal bipolar neuron	3 studies	55% ± 27%	Explore
renal principal cell	3 studies	90% ± 1%	Explore
thymocyte	3 studies	100% ± 0%	Explore
extravillous trophoblast	3 studies	100% ± 0%	Explore
placental villous trophoblast	3 studies	100% ± 0%	Explore
Schwann cell	3 studies	69% ± 35%	Explore
serous secreting cell	3 studies	85% ± 6%	Explore
tissue-resident macrophage	3 studies	75% ± 28%	Explore
follicular B cell	3 studies	100% ± 0%	Explore
intraepithelial lymphocyte	3 studies	99% ± 1%	Explore
rod bipolar cell	3 studies	68% ± 20%	Explore
myoepithelial cell	3 studies	100% ± 0%	Explore
luminal cell of prostate epithelium	3 studies	100% ± 0%	Explore
retinal pigment epithelial cell	3 studies	39% ± 13%	Explore
pancreatic ductal cell	3 studies	87% ± 9%	Explore
granulocyte monocyte progenitor cell	3 studies	81% ± 26%	Explore
megakaryocyte-erythroid progenitor cell	3 studies	100% ± 0%	Explore
keratinocyte	3 studies	98% ± 2%	Explore
central memory CD4-positive, alpha-beta T cell	3 studies	99% ± 1%	Explore
double-positive, alpha-beta thymocyte	3 studies	99% ± 1%	Explore
progenitor cell of mammary luminal epithelium	3 studies	100% ± 0%	Explore
mural cell	3 studies	52% ± 5%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
lung	19 studies	83% ± 18%	Explore
peripheral blood	19 studies	92% ± 13%	Explore
intestine	13 studies	89% ± 17%	Explore
brain	13 studies	43% ± 22%	Explore
eye	10 studies	58% ± 21%	Explore
kidney	8 studies	79% ± 21%	Explore
liver	7 studies	69% ± 25%	Explore
bone marrow	6 studies	92% ± 9%	Explore
pancreas	5 studies	77% ± 19%	Explore
uterus	5 studies	91% ± 14%	Explore
lymph node	4 studies	99% ± 1%	Explore
placenta	4 studies	88% ± 20%	Explore
heart	4 studies	50% ± 23%	Explore
adipose	4 studies	52% ± 30%	Explore
esophagus	4 studies	77% ± 21%	Explore
prostate	4 studies	95% ± 8%	Explore
breast	4 studies	97% ± 4%	Explore
skin	3 studies	77% ± 27%	Explore
stomach	3 studies	70% ± 19%	Explore
thymus	3 studies	74% ± 37%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
ovary	100%	60573.27	180 / 180	100%	793.50	430 / 430
pancreas	100%	38023.84	328 / 328	100%	835.35	178 / 178
uterus	100%	39198.69	170 / 170	100%	1267.56	459 / 459
skin	100%	62686.17	1809 / 1809	100%	929.50	471 / 472
thymus	100%	28683.34	652 / 653	100%	829.68	604 / 605
prostate	100%	40065.00	245 / 245	99%	1085.96	498 / 502
bladder	100%	35315.00	21 / 21	99%	1160.90	499 / 504
esophagus	100%	37531.24	1445 / 1445	99%	390.83	181 / 183
intestine	100%	34869.35	966 / 966	99%	1096.17	521 / 527
liver	100%	20391.67	226 / 226	99%	647.96	401 / 406
stomach	100%	28305.31	359 / 359	99%	792.47	282 / 286
kidney	100%	22689.60	89 / 89	99%	635.79	888 / 901
lung	100%	29224.85	576 / 578	99%	791.93	1142 / 1155
breast	100%	37314.77	459 / 459	98%	742.77	1100 / 1118
adrenal gland	100%	29523.59	258 / 258	97%	459.66	222 / 230
brain	97%	13211.16	2556 / 2642	99%	579.08	695 / 705
eye	0%	0	0 / 0	100%	2071.95	80 / 80
lymph node	0%	0	0 / 0	100%	2661.24	29 / 29
spleen	100%	48737.23	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	1070.38	45 / 45
ureter	0%	0	0 / 0	100%	1068.20	1 / 1
adipose	100%	30800.88	1201 / 1204	0%	0	0 / 0
blood vessel	99%	25828.50	1327 / 1335	0%	0	0 / 0
peripheral blood	97%	37406.50	899 / 929	0%	0	0 / 0
muscle	97%	16098.12	776 / 803	0%	0	0 / 0
heart	95%	13479.28	814 / 861	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

III. Associated gene sets

GO_0060266	Biological process	negative regulation of respiratory burst involved in inflammatory response
GO_0000028	Biological process	ribosomal small subunit assembly
GO_0007000	Biological process	nucleolus organization
GO_0050829	Biological process	defense response to Gram-negative bacterium
GO_0006412	Biological process	translation
GO_0042274	Biological process	ribosomal small subunit biogenesis
GO_0030218	Biological process	erythrocyte differentiation
GO_0031640	Biological process	killing of cells of another organism
GO_0030490	Biological process	maturation of SSU-rRNA
GO_0061844	Biological process	antimicrobial humoral immune response mediated by antimicrobial peptide
GO_0002548	Biological process	monocyte chemotaxis
GO_0060265	Biological process	positive regulation of respiratory burst involved in inflammatory response
GO_0000462	Biological process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO_0006364	Biological process	rRNA processing
GO_0002181	Biological process	cytoplasmic translation
GO_0005730	Cellular component	nucleolus
GO_0022626	Cellular component	cytosolic ribosome
GO_0022627	Cellular component	cytosolic small ribosomal subunit
GO_0005840	Cellular component	ribosome
GO_0016020	Cellular component	membrane
GO_0032040	Cellular component	small-subunit processome
GO_0070062	Cellular component	extracellular exosome
GO_0005654	Cellular component	nucleoplasm
GO_0005925	Cellular component	focal adhesion
GO_0005829	Cellular component	cytosol
GO_0014069	Cellular component	postsynaptic density
GO_0005737	Cellular component	cytoplasm
GO_0019901	Molecular function	protein kinase binding
GO_0042802	Molecular function	identical protein binding
GO_0003735	Molecular function	structural constituent of ribosome
GO_0003723	Molecular function	RNA binding
GO_0017134	Molecular function	fibroblast growth factor binding
GO_0005515	Molecular function	protein binding

IV. Literature review

[source]

Gene name	RPS19
Protein name	Small ribosomal subunit protein eS19 (40S ribosomal protein S19) Ribosomal protein S19
Synonyms	hCG_1995572
Description	FUNCTION: Component of the small ribosomal subunit . The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell . Required for pre-rRNA processing and maturation of 40S ribosomal subunits . Part of the small subunit (SSU) processome, first precursor of the small eukaryotic ribosomal subunit. During the assembly of the SSU processome in the nucleolus, many ribosome biogenesis factors, an RNA chaperone and ribosomal proteins associate with the nascent pre-rRNA and work in concert to generate RNA folding, modifications, rearrangements and cleavage as well as targeted degradation of pre-ribosomal RNA by the RNA exosome . .
Accessions	ENST00000598742.6 M0QYF7 A0A075B6E2 M0R140 P39019 B0ZBD0 M0R2L9 ENST00000598261.2 ENST00000598399.1 ENST00000221975.6 ENST00000601492.5 ENST00000593863.5 ENST00000600467.6

RPS19 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review