Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 5 studies | 20% ± 7% | |
epithelial cell | 4 studies | 33% ± 9% | |
fibroblast | 3 studies | 35% ± 16% | |
GABAergic neuron | 3 studies | 29% ± 3% | |
glutamatergic neuron | 3 studies | 36% ± 6% | |
dendritic cell | 3 studies | 31% ± 8% | |
natural killer cell | 3 studies | 18% ± 1% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 25% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 1176.24 | 21 / 21 | 100% | 18.13 | 504 / 504 |
breast | 100% | 1272.88 | 459 / 459 | 100% | 19.18 | 1118 / 1118 |
esophagus | 100% | 1001.10 | 1445 / 1445 | 100% | 15.41 | 183 / 183 |
kidney | 100% | 890.54 | 89 / 89 | 100% | 13.34 | 901 / 901 |
liver | 100% | 575.96 | 226 / 226 | 100% | 11.40 | 406 / 406 |
ovary | 100% | 1132.17 | 180 / 180 | 100% | 23.27 | 430 / 430 |
prostate | 100% | 1052.45 | 245 / 245 | 100% | 14.75 | 502 / 502 |
uterus | 100% | 1180.78 | 170 / 170 | 100% | 24.91 | 459 / 459 |
brain | 100% | 923.63 | 2640 / 2642 | 100% | 16.89 | 705 / 705 |
thymus | 100% | 956.89 | 653 / 653 | 100% | 16.17 | 604 / 605 |
skin | 100% | 1337.94 | 1809 / 1809 | 100% | 15.56 | 471 / 472 |
lung | 100% | 900.28 | 576 / 578 | 100% | 16.35 | 1155 / 1155 |
stomach | 100% | 827.22 | 359 / 359 | 100% | 15.84 | 285 / 286 |
pancreas | 100% | 521.87 | 327 / 328 | 99% | 13.96 | 177 / 178 |
adrenal gland | 100% | 987.90 | 258 / 258 | 99% | 15.23 | 228 / 230 |
intestine | 100% | 1031.00 | 966 / 966 | 99% | 15.07 | 520 / 527 |
adipose | 100% | 1252.73 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1130.66 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 13.87 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 25.01 | 29 / 29 |
spleen | 100% | 1216.86 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 20.46 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 17.04 | 1 / 1 |
muscle | 100% | 1004.66 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 854.62 | 855 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 91% | 724.11 | 845 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0001682 | Biological process | tRNA 5'-leader removal |
GO_0006364 | Biological process | rRNA processing |
GO_0008033 | Biological process | tRNA processing |
GO_0030681 | Cellular component | multimeric ribonuclease P complex |
GO_0000172 | Cellular component | ribonuclease MRP complex |
GO_0005655 | Cellular component | nucleolar ribonuclease P complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0033204 | Molecular function | ribonuclease P RNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0004526 | Molecular function | ribonuclease P activity |
GO_0003723 | Molecular function | RNA binding |
Gene name | RPP30 |
Protein name | Ribonuclease P/MRP subunit p30 Ribonuclease P protein subunit p30 (RNaseP protein p30) (RNase P subunit 2) |
Synonyms | RNASEP2 |
Description | FUNCTION: Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends . Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences . . |
Accessions | P78346 ENST00000413330.5 [P78346-2] ENST00000414836.1 ENST00000277882.7 ENST00000371703.8 [P78346-1] Q5VU11 Q5VU10 |