Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 5 studies | 20% ± 4% | |
oligodendrocyte precursor cell | 4 studies | 26% ± 9% | |
oligodendrocyte | 4 studies | 22% ± 5% | |
endothelial cell | 3 studies | 26% ± 2% | |
GABAergic neuron | 3 studies | 34% ± 8% | |
astrocyte | 3 studies | 25% ± 8% | |
glutamatergic neuron | 3 studies | 41% ± 9% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 32% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 740.15 | 1443 / 1445 | 99% | 9.93 | 182 / 183 |
breast | 100% | 811.21 | 459 / 459 | 99% | 10.61 | 1102 / 1118 |
lung | 100% | 904.45 | 577 / 578 | 99% | 7.67 | 1139 / 1155 |
ovary | 100% | 1840.01 | 180 / 180 | 97% | 6.57 | 416 / 430 |
uterus | 100% | 1483.89 | 170 / 170 | 96% | 6.72 | 439 / 459 |
prostate | 100% | 1128.92 | 245 / 245 | 95% | 7.17 | 477 / 502 |
stomach | 99% | 612.10 | 356 / 359 | 96% | 7.00 | 274 / 286 |
intestine | 100% | 849.50 | 966 / 966 | 94% | 5.96 | 496 / 527 |
brain | 97% | 483.90 | 2568 / 2642 | 97% | 6.56 | 683 / 705 |
thymus | 100% | 1264.15 | 653 / 653 | 94% | 5.89 | 569 / 605 |
pancreas | 99% | 493.08 | 326 / 328 | 93% | 5.48 | 166 / 178 |
bladder | 100% | 980.67 | 21 / 21 | 92% | 5.72 | 465 / 504 |
kidney | 100% | 648.55 | 89 / 89 | 92% | 5.80 | 826 / 901 |
skin | 99% | 776.17 | 1790 / 1809 | 90% | 6.80 | 427 / 472 |
adrenal gland | 100% | 690.75 | 258 / 258 | 77% | 3.02 | 177 / 230 |
liver | 98% | 389.11 | 222 / 226 | 56% | 2.30 | 228 / 406 |
spleen | 100% | 1029.34 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.06 | 1 / 1 |
blood vessel | 100% | 898.44 | 1332 / 1335 | 0% | 0 | 0 / 0 |
adipose | 99% | 729.84 | 1197 / 1204 | 0% | 0 | 0 / 0 |
muscle | 99% | 531.44 | 793 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 717.61 | 844 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 6.89 | 43 / 45 |
lymph node | 0% | 0 | 0 / 0 | 79% | 5.75 | 23 / 29 |
eye | 0% | 0 | 0 / 0 | 70% | 3.43 | 56 / 80 |
peripheral blood | 64% | 722.15 | 599 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0043484 | Biological process | regulation of RNA splicing |
GO_0005654 | Cellular component | nucleoplasm |
GO_1990904 | Cellular component | ribonucleoprotein complex |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | RBM12B |
Protein name | RNA-binding protein 12B RNA-binding protein 12B (RNA-binding motif protein 12B) |
Synonyms | |
Description | |
Accessions | ENST00000517700.6 ENST00000520560.6 ENST00000399300.7 ENST00000519109.6 ENST00000517700 ENST00000519109 B9ZVT1 E5RJ83 ENST00000520560 Q8IXT5 ENST00000518597 E5RHG1 E5RJV8 ENST00000518597.2 |