Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 3575.51 | 459 / 459 | 100% | 58.79 | 1118 / 1118 |
esophagus | 100% | 3867.52 | 1445 / 1445 | 100% | 54.02 | 183 / 183 |
lung | 100% | 3169.42 | 578 / 578 | 100% | 50.25 | 1155 / 1155 |
ovary | 100% | 2387.77 | 180 / 180 | 100% | 31.58 | 430 / 430 |
stomach | 100% | 2591.80 | 359 / 359 | 100% | 44.92 | 286 / 286 |
uterus | 100% | 2854.53 | 170 / 170 | 100% | 55.65 | 459 / 459 |
intestine | 100% | 3470.44 | 966 / 966 | 100% | 49.56 | 526 / 527 |
bladder | 100% | 3798.95 | 21 / 21 | 100% | 49.98 | 503 / 504 |
prostate | 100% | 2765.02 | 245 / 245 | 100% | 40.36 | 501 / 502 |
brain | 99% | 2167.05 | 2626 / 2642 | 100% | 49.65 | 705 / 705 |
pancreas | 99% | 1911.22 | 326 / 328 | 100% | 39.96 | 178 / 178 |
thymus | 100% | 2898.02 | 653 / 653 | 99% | 38.58 | 601 / 605 |
skin | 100% | 4810.59 | 1809 / 1809 | 99% | 51.31 | 467 / 472 |
kidney | 100% | 2223.26 | 89 / 89 | 98% | 33.96 | 887 / 901 |
liver | 99% | 1884.82 | 224 / 226 | 99% | 24.71 | 400 / 406 |
adrenal gland | 100% | 3535.27 | 258 / 258 | 95% | 29.95 | 218 / 230 |
adipose | 100% | 4046.73 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3842.80 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 59.48 | 29 / 29 |
muscle | 100% | 4522.12 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2691.13 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 61.10 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 18.22 | 1 / 1 |
heart | 97% | 2674.31 | 835 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 94% | 23.16 | 75 / 80 |
peripheral blood | 66% | 2097.09 | 617 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_1990737 | Biological process | response to manganese-induced endoplasmic reticulum stress |
GO_0034063 | Biological process | stress granule assembly |
GO_0034605 | Biological process | cellular response to heat |
GO_1904373 | Biological process | response to kainic acid |
GO_0034644 | Biological process | cellular response to UV |
GO_0034976 | Biological process | response to endoplasmic reticulum stress |
GO_0036490 | Biological process | regulation of translation in response to endoplasmic reticulum stress |
GO_0140468 | Biological process | HRI-mediated signaling |
GO_0006413 | Biological process | translational initiation |
GO_0036499 | Biological process | PERK-mediated unfolded protein response |
GO_0034599 | Biological process | cellular response to oxidative stress |
GO_0034198 | Biological process | cellular response to amino acid starvation |
GO_0043558 | Biological process | regulation of translational initiation in response to stress |
GO_0000423 | Biological process | mitophagy |
GO_2000676 | Biological process | positive regulation of type B pancreatic cell apoptotic process |
GO_0032057 | Biological process | negative regulation of translational initiation in response to stress |
GO_0005850 | Cellular component | eukaryotic translation initiation factor 2 complex |
GO_0016020 | Cellular component | membrane |
GO_0005739 | Cellular component | mitochondrion |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005829 | Cellular component | cytosol |
GO_0045202 | Cellular component | synapse |
GO_0097451 | Cellular component | glial limiting end-foot |
GO_0033290 | Cellular component | eukaryotic 48S preinitiation complex |
GO_0044207 | Cellular component | translation initiation ternary complex |
GO_0010494 | Cellular component | cytoplasmic stress granule |
GO_0005634 | Cellular component | nucleus |
GO_0043022 | Molecular function | ribosome binding |
GO_0003743 | Molecular function | translation initiation factor activity |
GO_0003723 | Molecular function | RNA binding |
GO_0005515 | Molecular function | protein binding |
Gene name | EIF2S1 |
Protein name | Eukaryotic translation initiation factor 2 subunit 1 (Eukaryotic translation initiation factor 2 subunit alpha) (eIF-2-alpha) (eIF-2A) (eIF-2alpha) (eIF2-alpha) Eukaryotic translation initiation factor 2 subunit 1 (Eukaryotic translation initiation factor 2 subunit alpha) |
Synonyms | hCG_21909 EIF2A |
Description | FUNCTION: Member of the eIF2 complex that functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA . This complex binds to a 40S ribosomal subunit, followed by mRNA binding to form a 43S pre-initiation complex (43S PIC) . Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF2 and release of an eIF2-GDP binary complex . In order for eIF2 to recycle and catalyze another round of initiation, the GDP bound to eIF2 must exchange with GTP by way of a reaction catalyzed by eIF2B . EIF2S1/ component of the integrated stress response (ISR), required for adaptation to various stress: phosphorylation by metabolic-stress sensing protein kinases (EIF2AK1/HRI, EIF2AK2/PKR, EIF2AK3/PERK and EIF2AK4/GCN2) in response to stress converts EIF2S1/eIF2-alpha in a global protein synthesis inhibitor, leading to an attenuation of cap-dependent translation, while concomitantly initiating the preferential translation of ISR-specific mRNAs, such as the transcriptional activators ATF4 and QRICH1, and hence allowing ATF4- and QRICH1-mediated reprogramming . . |
Accessions | G3V4T5 H0YJS4 P05198 ENST00000557310.5 ENST00000256383.11 ENST00000466499.6 Q53XC0 ENST00000555876.1 |