RPS11 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
B cell	51 studies	87% ± 20%	Explore
macrophage	44 studies	72% ± 24%	Explore
natural killer cell	43 studies	79% ± 19%	Explore
endothelial cell	43 studies	69% ± 27%	Explore
T cell	40 studies	73% ± 26%	Explore
fibroblast	39 studies	77% ± 25%	Explore
CD8-positive, alpha-beta T cell	38 studies	78% ± 20%	Explore
CD4-positive, alpha-beta T cell	35 studies	85% ± 16%	Explore
pericyte	34 studies	78% ± 24%	Explore
plasmacytoid dendritic cell	31 studies	87% ± 18%	Explore
conventional dendritic cell	30 studies	93% ± 8%	Explore
dendritic cell	29 studies	84% ± 20%	Explore
smooth muscle cell	29 studies	77% ± 26%	Explore
endothelial cell of lymphatic vessel	27 studies	71% ± 28%	Explore
classical monocyte	26 studies	85% ± 12%	Explore
regulatory T cell	26 studies	85% ± 14%	Explore
monocyte	25 studies	77% ± 20%	Explore
plasma cell	25 studies	86% ± 15%	Explore
epithelial cell	25 studies	78% ± 26%	Explore
mature NK T cell	24 studies	76% ± 19%	Explore
non-classical monocyte	24 studies	87% ± 12%	Explore
mast cell	23 studies	72% ± 26%	Explore
gamma-delta T cell	21 studies	82% ± 18%	Explore
memory B cell	21 studies	94% ± 7%	Explore
basal cell	21 studies	83% ± 19%	Explore
connective tissue cell	20 studies	83% ± 20%	Explore
naive B cell	19 studies	88% ± 18%	Explore
ciliated cell	17 studies	76% ± 20%	Explore
mucosal invariant T cell	16 studies	80% ± 17%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	16 studies	86% ± 14%	Explore
CD16-negative, CD56-bright natural killer cell, human	15 studies	78% ± 19%	Explore
CD16-positive, CD56-dim natural killer cell, human	15 studies	79% ± 13%	Explore
endothelial cell of artery	15 studies	68% ± 22%	Explore
capillary endothelial cell	15 studies	65% ± 18%	Explore
vein endothelial cell	15 studies	67% ± 24%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	14 studies	92% ± 8%	Explore
myofibroblast cell	14 studies	85% ± 21%	Explore
myeloid cell	14 studies	79% ± 27%	Explore
CD8-positive, alpha-beta memory T cell	13 studies	85% ± 16%	Explore
neutrophil	13 studies	53% ± 25%	Explore
astrocyte	13 studies	34% ± 13%	Explore
goblet cell	13 studies	71% ± 23%	Explore
effector memory CD8-positive, alpha-beta T cell	12 studies	76% ± 23%	Explore
innate lymphoid cell	12 studies	84% ± 15%	Explore
plasmablast	12 studies	88% ± 10%	Explore
CD4-positive, alpha-beta memory T cell	12 studies	85% ± 14%	Explore
secretory cell	12 studies	84% ± 18%	Explore
microglial cell	12 studies	55% ± 26%	Explore
mesothelial cell	12 studies	73% ± 29%	Explore
endothelial cell of vascular tree	12 studies	80% ± 26%	Explore
erythrocyte	12 studies	59% ± 23%	Explore
leukocyte	11 studies	75% ± 27%	Explore
T follicular helper cell	10 studies	89% ± 8%	Explore
progenitor cell	10 studies	88% ± 16%	Explore
IgG plasma cell	10 studies	73% ± 24%	Explore
type I pneumocyte	9 studies	65% ± 24%	Explore
type II pneumocyte	9 studies	82% ± 22%	Explore
IgA plasma cell	9 studies	70% ± 28%	Explore
hematopoietic stem cell	9 studies	89% ± 25%	Explore
club cell	8 studies	76% ± 20%	Explore
platelet	8 studies	50% ± 24%	Explore
abnormal cell	8 studies	76% ± 25%	Explore
neuron	8 studies	64% ± 22%	Explore
enterocyte	8 studies	63% ± 27%	Explore
respiratory goblet cell	7 studies	70% ± 17%	Explore
mononuclear phagocyte	7 studies	82% ± 23%	Explore
glutamatergic neuron	7 studies	29% ± 14%	Explore
epithelial cell of proximal tubule	7 studies	73% ± 15%	Explore
enteroendocrine cell	7 studies	72% ± 31%	Explore
transit amplifying cell	7 studies	68% ± 28%	Explore
retinal rod cell	7 studies	49% ± 15%	Explore
precursor B cell	7 studies	84% ± 23%	Explore
immature B cell	7 studies	86% ± 26%	Explore
alveolar macrophage	6 studies	79% ± 23%	Explore
hematopoietic precursor cell	6 studies	79% ± 28%	Explore
kidney loop of Henle epithelial cell	6 studies	71% ± 12%	Explore
renal alpha-intercalated cell	6 studies	91% ± 8%	Explore
erythroblast	6 studies	74% ± 19%	Explore
amacrine cell	6 studies	43% ± 11%	Explore
retinal ganglion cell	6 studies	55% ± 20%	Explore
retinal cone cell	6 studies	48% ± 27%	Explore
brush cell	6 studies	79% ± 18%	Explore
glial cell	6 studies	54% ± 28%	Explore
effector memory CD4-positive, alpha-beta T cell	6 studies	92% ± 9%	Explore
effector CD8-positive, alpha-beta T cell	6 studies	90% ± 8%	Explore
oligodendrocyte precursor cell	6 studies	40% ± 28%	Explore
CD4-positive helper T cell	5 studies	82% ± 13%	Explore
central memory CD8-positive, alpha-beta T cell	5 studies	84% ± 20%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	5 studies	73% ± 16%	Explore
ionocyte	5 studies	72% ± 11%	Explore
kidney distal convoluted tubule epithelial cell	5 studies	83% ± 15%	Explore
megakaryocyte	5 studies	75% ± 19%	Explore
oligodendrocyte	5 studies	30% ± 5%	Explore
intestinal crypt stem cell	5 studies	81% ± 32%	Explore
OFF-bipolar cell	5 studies	56% ± 16%	Explore
ON-bipolar cell	5 studies	55% ± 15%	Explore
lymphocyte	5 studies	79% ± 28%	Explore
pro-B cell	5 studies	77% ± 31%	Explore
T-helper 17 cell	5 studies	94% ± 5%	Explore
group 3 innate lymphoid cell	5 studies	88% ± 6%	Explore
Mueller cell	5 studies	61% ± 10%	Explore
double negative thymocyte	5 studies	91% ± 7%	Explore
effector CD4-positive, alpha-beta T cell	5 studies	87% ± 18%	Explore
granulocyte	5 studies	89% ± 15%	Explore
intermediate monocyte	5 studies	82% ± 14%	Explore
melanocyte	5 studies	69% ± 27%	Explore
CD4-positive, alpha-beta cytotoxic T cell	4 studies	65% ± 28%	Explore
deuterosomal cell	4 studies	72% ± 10%	Explore
duct epithelial cell	4 studies	88% ± 11%	Explore
exhausted T cell	4 studies	85% ± 12%	Explore
precursor cell	4 studies	82% ± 16%	Explore
pancreatic A cell	4 studies	93% ± 8%	Explore
type B pancreatic cell	4 studies	92% ± 9%	Explore
glomerular endothelial cell	4 studies	76% ± 13%	Explore
kidney connecting tubule epithelial cell	4 studies	80% ± 11%	Explore
podocyte	4 studies	81% ± 14%	Explore
GABAergic amacrine cell	4 studies	35% ± 11%	Explore
glycinergic amacrine cell	4 studies	37% ± 8%	Explore
neuroendocrine cell	4 studies	92% ± 4%	Explore
adventitial cell	4 studies	82% ± 16%	Explore
mucus secreting cell	4 studies	76% ± 32%	Explore
retina horizontal cell	4 studies	47% ± 12%	Explore
inflammatory macrophage	4 studies	77% ± 14%	Explore
acinar cell	4 studies	77% ± 25%	Explore
muscle cell	4 studies	51% ± 20%	Explore
germinal center B cell	4 studies	90% ± 6%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	90% ± 5%	Explore
hepatocyte	4 studies	61% ± 31%	Explore
IgM plasma cell	4 studies	76% ± 25%	Explore
GABAergic neuron	4 studies	35% ± 5%	Explore
interneuron	4 studies	49% ± 25%	Explore
T-helper 1 cell	4 studies	95% ± 3%	Explore
squamous epithelial cell	3 studies	58% ± 22%	Explore
pancreatic D cell	3 studies	93% ± 5%	Explore
renal beta-intercalated cell	3 studies	96% ± 3%	Explore
neural crest cell	3 studies	98% ± 1%	Explore
paneth cell	3 studies	90% ± 8%	Explore
retinal bipolar neuron	3 studies	53% ± 16%	Explore
renal principal cell	3 studies	69% ± 12%	Explore
thymocyte	3 studies	97% ± 3%	Explore
extravillous trophoblast	3 studies	99% ± 1%	Explore
placental villous trophoblast	3 studies	100% ± 0%	Explore
Schwann cell	3 studies	62% ± 33%	Explore
serous secreting cell	3 studies	81% ± 10%	Explore
tissue-resident macrophage	3 studies	71% ± 28%	Explore
follicular B cell	3 studies	89% ± 11%	Explore
intraepithelial lymphocyte	3 studies	82% ± 11%	Explore
rod bipolar cell	3 studies	70% ± 9%	Explore
endothelial cell of sinusoid	3 studies	58% ± 28%	Explore
myoepithelial cell	3 studies	92% ± 6%	Explore
cholangiocyte	3 studies	48% ± 32%	Explore
luminal cell of prostate epithelium	3 studies	99% ± 0%	Explore
retinal pigment epithelial cell	3 studies	42% ± 19%	Explore
pancreatic ductal cell	3 studies	88% ± 6%	Explore
granulocyte monocyte progenitor cell	3 studies	76% ± 30%	Explore
megakaryocyte-erythroid progenitor cell	3 studies	99% ± 0%	Explore
keratinocyte	3 studies	93% ± 7%	Explore
central memory CD4-positive, alpha-beta T cell	3 studies	92% ± 5%	Explore
double-positive, alpha-beta thymocyte	3 studies	93% ± 1%	Explore
progenitor cell of mammary luminal epithelium	3 studies	93% ± 6%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
lung	19 studies	74% ± 22%	Explore
peripheral blood	19 studies	86% ± 10%	Explore
intestine	13 studies	78% ± 21%	Explore
brain	12 studies	39% ± 20%	Explore
eye	10 studies	56% ± 18%	Explore
kidney	8 studies	74% ± 18%	Explore
bone marrow	6 studies	88% ± 8%	Explore
liver	6 studies	70% ± 23%	Explore
pancreas	5 studies	83% ± 19%	Explore
uterus	5 studies	89% ± 13%	Explore
lymph node	4 studies	91% ± 5%	Explore
placenta	4 studies	85% ± 24%	Explore
adipose	4 studies	38% ± 24%	Explore
esophagus	4 studies	61% ± 32%	Explore
prostate	4 studies	87% ± 21%	Explore
breast	4 studies	88% ± 6%	Explore
heart	3 studies	51% ± 18%	Explore
skin	3 studies	87% ± 9%	Explore
stomach	3 studies	52% ± 31%	Explore
thymus	3 studies	78% ± 27%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
ovary	100%	111175.31	180 / 180	100%	3450.74	430 / 430
pancreas	100%	40989.55	328 / 328	100%	2632.31	178 / 178
skin	100%	68878.51	1809 / 1809	100%	2806.34	472 / 472
thymus	100%	45789.32	653 / 653	100%	3125.01	605 / 605
uterus	100%	70499.86	170 / 170	100%	3221.61	459 / 459
prostate	100%	57094.39	245 / 245	100%	4109.68	501 / 502
stomach	100%	41452.02	359 / 359	100%	2682.41	285 / 286
intestine	100%	52732.53	966 / 966	100%	3254.88	525 / 527
adrenal gland	100%	40028.35	258 / 258	100%	1999.53	229 / 230
breast	100%	64766.70	459 / 459	99%	2668.07	1112 / 1118
esophagus	100%	45329.81	1445 / 1445	99%	1486.79	182 / 183
brain	100%	24641.52	2631 / 2642	100%	2049.37	704 / 705
lung	100%	44020.11	577 / 578	99%	2462.51	1149 / 1155
kidney	100%	39362.97	89 / 89	99%	2191.16	894 / 901
bladder	100%	53214.71	21 / 21	99%	3221.47	500 / 504
liver	98%	18095.05	222 / 226	100%	1760.43	404 / 406
adipose	100%	58360.93	1204 / 1204	0%	0	0 / 0
blood vessel	100%	51374.06	1335 / 1335	0%	0	0 / 0
eye	0%	0	0 / 0	100%	4914.14	80 / 80
lymph node	0%	0	0 / 0	100%	6266.21	29 / 29
spleen	100%	59522.99	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	2711.57	45 / 45
ureter	0%	0	0 / 0	100%	2148.18	1 / 1
peripheral blood	100%	51540.19	925 / 929	0%	0	0 / 0
muscle	100%	37952.65	799 / 803	0%	0	0 / 0
heart	98%	24414.25	842 / 861	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

III. Associated gene sets

GO_0006412	Biological process	translation
GO_0042274	Biological process	ribosomal small subunit biogenesis
GO_0002181	Biological process	cytoplasmic translation
GO_0005730	Cellular component	nucleolus
GO_0022626	Cellular component	cytosolic ribosome
GO_0022627	Cellular component	cytosolic small ribosomal subunit
GO_0005840	Cellular component	ribosome
GO_0016020	Cellular component	membrane
GO_0032040	Cellular component	small-subunit processome
GO_0070062	Cellular component	extracellular exosome
GO_0005654	Cellular component	nucleoplasm
GO_0005925	Cellular component	focal adhesion
GO_0005829	Cellular component	cytosol
GO_0045202	Cellular component	synapse
GO_0005737	Cellular component	cytoplasm
GO_0019843	Molecular function	rRNA binding
GO_0003735	Molecular function	structural constituent of ribosome
GO_0003723	Molecular function	RNA binding
GO_0005515	Molecular function	protein binding

IV. Literature review

[source]

Gene name	RPS11
Protein name	Small ribosomal subunit protein uS17 (40S ribosomal protein S11) Ribosomal protein S11
Synonyms
Description	FUNCTION: Component of the small ribosomal subunit. The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. Part of the small subunit (SSU) processome, first precursor of the small eukaryotic ribosomal subunit. During the assembly of the SSU processome in the nucleolus, many ribosome biogenesis factors, an RNA chaperone and ribosomal proteins associate with the nascent pre-rRNA and work in concert to generate RNA folding, modifications, rearrangements and cleavage as well as targeted degradation of pre-ribosomal RNA by the RNA exosome . .
Accessions	ENST00000599561.1 ENST00000601306.1 M0QZ90 M0R1H5 ENST00000594493.1 P62280 ENST00000596873.1 M0QZC5 M0R1H6 ENST00000270625.7

RPS11 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review