Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 3 studies | 29% ± 10% |
Insufficient scRNA-seq data for expression of RBM15B at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3810.10 | 1445 / 1445 | 100% | 40.38 | 183 / 183 |
prostate | 100% | 3072.47 | 245 / 245 | 100% | 48.62 | 502 / 502 |
stomach | 100% | 3054.38 | 359 / 359 | 100% | 41.85 | 286 / 286 |
breast | 100% | 3452.60 | 459 / 459 | 100% | 46.95 | 1117 / 1118 |
thymus | 100% | 3081.30 | 653 / 653 | 100% | 41.09 | 604 / 605 |
intestine | 100% | 3654.40 | 966 / 966 | 100% | 41.69 | 526 / 527 |
skin | 100% | 4483.13 | 1809 / 1809 | 100% | 42.05 | 471 / 472 |
ovary | 100% | 3420.76 | 180 / 180 | 100% | 41.84 | 429 / 430 |
pancreas | 100% | 2651.86 | 327 / 328 | 100% | 33.66 | 178 / 178 |
bladder | 100% | 3518.81 | 21 / 21 | 100% | 42.76 | 502 / 504 |
lung | 100% | 2843.51 | 578 / 578 | 100% | 36.03 | 1150 / 1155 |
uterus | 100% | 4010.26 | 170 / 170 | 100% | 42.90 | 457 / 459 |
brain | 99% | 2004.63 | 2620 / 2642 | 100% | 35.45 | 704 / 705 |
kidney | 100% | 2104.54 | 89 / 89 | 99% | 24.83 | 888 / 901 |
liver | 100% | 1465.89 | 226 / 226 | 98% | 19.76 | 396 / 406 |
adrenal gland | 100% | 2739.28 | 258 / 258 | 95% | 21.00 | 219 / 230 |
adipose | 100% | 3367.82 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 30.22 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 34.90 | 29 / 29 |
spleen | 100% | 2868.96 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 40.38 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 32.72 | 1 / 1 |
blood vessel | 100% | 3281.32 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 1686.62 | 847 / 861 | 0% | 0 | 0 / 0 |
muscle | 87% | 903.45 | 700 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 83% | 1629.00 | 769 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006913 | Biological process | nucleocytoplasmic transport |
GO_0006406 | Biological process | mRNA export from nucleus |
GO_0009048 | Biological process | dosage compensation by inactivation of X chromosome |
GO_0001510 | Biological process | RNA methylation |
GO_0008380 | Biological process | RNA splicing |
GO_0006397 | Biological process | mRNA processing |
GO_0000381 | Biological process | regulation of alternative mRNA splicing, via spliceosome |
GO_0045892 | Biological process | negative regulation of DNA-templated transcription |
GO_0016607 | Cellular component | nuclear speck |
GO_0005730 | Cellular component | nucleolus |
GO_0005654 | Cellular component | nucleoplasm |
GO_0036396 | Cellular component | RNA N6-methyladenosine methyltransferase complex |
GO_0005635 | Cellular component | nuclear envelope |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
GO_0003729 | Molecular function | mRNA binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | RBM15B |
Protein name | RBM15B protein Alternative protein RBM15B Putative RNA-binding protein 15B (One-twenty two protein 3) (HsOTT3) (HuOTT3) (RNA-binding motif protein 15B) |
Synonyms | OTT3 |
Description | FUNCTION: RNA-binding protein that acts as a key regulator of N6-methyladenosine (m6A) methylation of RNAs, thereby regulating different processes, such as alternative splicing of mRNAs and X chromosome inactivation mediated by Xist RNA . Associated component of the WMM complex, a complex that mediates N6-methyladenosine (m6A) methylation of RNAs, a modification that plays a role in the efficiency of mRNA splicing and RNA processing . Plays a key role in m6A methylation, possibly by binding target RNAs and recruiting the WMM complex . Involved in random X inactivation mediated by Xist RNA: acts by binding Xist RNA and recruiting the WMM complex, which mediates m6A methylation, leading to target YTHDC1 reader on Xist RNA and promoting transcription repression activity of Xist . Functions in the regulation of alternative or illicit splicing, possibly by regulating m6A methylation . Inhibits pre-mRNA splicing . Also functions as a mRNA export factor by acting as a cofactor for the nuclear export receptor NXF1 . . |
Accessions | Q8NDT2 L8EAN0 ENST00000563281.2 [Q8NDT2-1] Q0VA89 |