SMNDC1 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
natural killer cell	12 studies	21% ± 3%	Explore
B cell	10 studies	18% ± 3%	Explore
regulatory T cell	9 studies	18% ± 2%	Explore
endothelial cell	8 studies	22% ± 4%	Explore
naive B cell	8 studies	20% ± 3%	Explore
CD16-positive, CD56-dim natural killer cell, human	8 studies	20% ± 3%	Explore
CD16-negative, CD56-bright natural killer cell, human	7 studies	19% ± 2%	Explore
effector memory CD8-positive, alpha-beta T cell	6 studies	18% ± 2%	Explore
CD8-positive, alpha-beta T cell	6 studies	19% ± 3%	Explore
classical monocyte	5 studies	24% ± 5%	Explore
non-classical monocyte	5 studies	25% ± 7%	Explore
CD4-positive, alpha-beta T cell	5 studies	19% ± 3%	Explore
mucosal invariant T cell	5 studies	19% ± 2%	Explore
epithelial cell	5 studies	35% ± 18%	Explore
CD8-positive, alpha-beta memory T cell	5 studies	20% ± 4%	Explore
gamma-delta T cell	5 studies	25% ± 12%	Explore
memory B cell	5 studies	18% ± 2%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	4 studies	17% ± 2%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	4 studies	17% ± 1%	Explore
mature NK T cell	4 studies	16% ± 1%	Explore
plasmacytoid dendritic cell	4 studies	21% ± 4%	Explore
T cell	3 studies	20% ± 3%	Explore
effector CD8-positive, alpha-beta T cell	3 studies	17% ± 1%	Explore
leukocyte	3 studies	19% ± 0%	Explore
precursor B cell	3 studies	23% ± 3%	Explore
immature B cell	3 studies	23% ± 5%	Explore
ciliated cell	3 studies	25% ± 7%	Explore
dendritic cell	3 studies	40% ± 8%	Explore
effector memory CD4-positive, alpha-beta T cell	3 studies	19% ± 3%	Explore
fibroblast	3 studies	19% ± 2%	Explore
GABAergic neuron	3 studies	20% ± 4%	Explore
glutamatergic neuron	3 studies	25% ± 7%	Explore
double negative thymocyte	3 studies	26% ± 10%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	8 studies	19% ± 4%	Explore
brain	4 studies	18% ± 2%	Explore
intestine	3 studies	18% ± 2%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	1907.58	1445 / 1445	100%	21.27	183 / 183
lung	100%	2127.31	578 / 578	100%	23.34	1155 / 1155
ovary	100%	1980.71	180 / 180	100%	19.94	430 / 430
breast	100%	2181.23	459 / 459	100%	23.56	1117 / 1118
bladder	100%	1834.57	21 / 21	100%	21.75	503 / 504
uterus	100%	2123.67	170 / 170	100%	26.55	458 / 459
stomach	100%	1374.13	359 / 359	100%	18.65	285 / 286
prostate	100%	1682.99	245 / 245	99%	16.50	499 / 502
brain	99%	1227.51	2626 / 2642	100%	16.69	705 / 705
thymus	100%	2025.50	653 / 653	99%	20.20	601 / 605
intestine	100%	1866.46	966 / 966	99%	20.64	520 / 527
pancreas	100%	902.76	327 / 328	99%	19.48	176 / 178
adrenal gland	100%	1648.78	258 / 258	98%	15.29	225 / 230
kidney	100%	1548.43	89 / 89	98%	16.22	881 / 901
skin	100%	2134.33	1809 / 1809	98%	20.01	461 / 472
liver	100%	922.09	226 / 226	93%	10.17	378 / 406
adipose	100%	2295.85	1204 / 1204	0%	0	0 / 0
blood vessel	100%	2262.88	1335 / 1335	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	23.59	29 / 29
muscle	100%	1903.57	803 / 803	0%	0	0 / 0
spleen	100%	1966.38	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	22.50	45 / 45
ureter	0%	0	0 / 0	100%	11.71	1 / 1
heart	98%	1211.05	843 / 861	0%	0	0 / 0
peripheral blood	98%	1845.23	906 / 929	0%	0	0 / 0
eye	0%	0	0 / 0	95%	12.74	76 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0