Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 18 studies | 38% ± 13% | |
peripheral blood | 18 studies | 33% ± 9% | |
brain | 17 studies | 32% ± 14% | |
intestine | 10 studies | 30% ± 10% | |
kidney | 9 studies | 36% ± 9% | |
eye | 8 studies | 34% ± 11% | |
liver | 7 studies | 32% ± 16% | |
bone marrow | 5 studies | 35% ± 15% | |
uterus | 5 studies | 44% ± 18% | |
lymph node | 5 studies | 32% ± 19% | |
pancreas | 4 studies | 64% ± 21% | |
adipose | 4 studies | 24% ± 6% | |
breast | 4 studies | 33% ± 5% | |
prostate | 4 studies | 22% ± 6% | |
placenta | 3 studies | 65% ± 18% | |
thymus | 3 studies | 39% ± 12% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 24606.09 | 459 / 459 | 100% | 490.64 | 1118 / 1118 |
ovary | 100% | 26576.92 | 180 / 180 | 100% | 291.77 | 430 / 430 |
prostate | 100% | 21544.69 | 245 / 245 | 100% | 509.40 | 502 / 502 |
esophagus | 100% | 19586.97 | 1444 / 1445 | 100% | 340.66 | 183 / 183 |
lung | 100% | 25321.01 | 578 / 578 | 100% | 358.20 | 1154 / 1155 |
brain | 100% | 20280.79 | 2639 / 2642 | 100% | 449.08 | 705 / 705 |
intestine | 100% | 22495.08 | 966 / 966 | 100% | 367.83 | 526 / 527 |
stomach | 100% | 18875.32 | 359 / 359 | 100% | 329.15 | 285 / 286 |
thymus | 100% | 37238.07 | 653 / 653 | 99% | 425.50 | 601 / 605 |
liver | 100% | 22080.95 | 226 / 226 | 99% | 354.53 | 403 / 406 |
kidney | 100% | 22927.70 | 89 / 89 | 99% | 496.10 | 893 / 901 |
uterus | 100% | 26385.68 | 170 / 170 | 99% | 287.43 | 454 / 459 |
pancreas | 100% | 24425.38 | 328 / 328 | 99% | 294.38 | 176 / 178 |
bladder | 100% | 23800.10 | 21 / 21 | 99% | 290.16 | 497 / 504 |
skin | 100% | 27720.48 | 1809 / 1809 | 98% | 421.99 | 464 / 472 |
adrenal gland | 100% | 23268.72 | 258 / 258 | 98% | 347.76 | 226 / 230 |
adipose | 100% | 25994.44 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 29995.03 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 206.03 | 29 / 29 |
spleen | 100% | 15496.24 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 68.09 | 1 / 1 |
muscle | 99% | 13277.78 | 791 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 279.47 | 44 / 45 |
heart | 96% | 19123.48 | 828 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 94% | 279.21 | 75 / 80 |
peripheral blood | 83% | 14693.29 | 768 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0048488 | Biological process | synaptic vesicle endocytosis |
GO_0006457 | Biological process | protein folding |
GO_0034975 | Biological process | protein folding in endoplasmic reticulum |
GO_0019082 | Biological process | viral protein processing |
GO_0072583 | Biological process | clathrin-dependent endocytosis |
GO_0036503 | Biological process | ERAD pathway |
GO_0009306 | Biological process | protein secretion |
GO_0098793 | Cellular component | presynapse |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0031966 | Cellular component | mitochondrial membrane |
GO_0070062 | Cellular component | extracellular exosome |
GO_0044322 | Cellular component | endoplasmic reticulum quality control compartment |
GO_0033162 | Cellular component | melanosome membrane |
GO_0005788 | Cellular component | endoplasmic reticulum lumen |
GO_0044233 | Cellular component | mitochondria-associated endoplasmic reticulum membrane contact site |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0098553 | Cellular component | lumenal side of endoplasmic reticulum membrane |
GO_0031965 | Cellular component | nuclear membrane |
GO_0030246 | Molecular function | carbohydrate binding |
GO_0051082 | Molecular function | unfolded protein binding |
GO_0003723 | Molecular function | RNA binding |
GO_0005509 | Molecular function | calcium ion binding |
GO_0005515 | Molecular function | protein binding |
Gene name | CANX |
Protein name | Calnexin (IP90) (Major histocompatibility complex class I antigen-binding protein p88) (p90) Calnexin |
Synonyms | |
Description | FUNCTION: Calcium-binding protein that interacts with newly synthesized monoglucosylated glycoproteins in the endoplasmic reticulum. It may act in assisting protein assembly and/or in the retention within the ER of unassembled protein subunits. It seems to play a major role in the quality control apparatus of the ER by the retention of incorrectly folded proteins. Associated with partial T-cell antigen receptor complexes that escape the ER of immature thymocytes, it may function as a signaling complex regulating thymocyte maturation. Additionally it may play a role in receptor-mediated endocytosis at the synapse. FUNCTION: Calcium-binding protein that interacts with newly synthesized monoglucosylated glycoproteins in the endoplasmic reticulum. It may act in assisting protein assembly and/or in the retention within the ER of unassembled protein subunits. It seems to play a major role in the quality control apparatus of the ER by the retention of incorrectly folded proteins. Associated with partial T-cell antigen receptor complexes that escape the ER of immature thymocytes, it may function as a signaling complex regulating thymocyte maturation. Additionally it may play a role in receptor-mediated endocytosis at the synapse. . FUNCTION: Calcium-binding protein that interacts with newly synthesized monoglucosylated glycoproteins in the endoplasmic reticulum. It may act in assisting protein assembly and/or in the retention within the ER of unassembled protein subunits. It seems to play a major role in the quality control apparatus of the ER by the retention of incorrectly folded proteins. Associated with partial T-cell antigen receptor complexes that escape the ER of immature thymocytes, it may function as a signaling complex regulating thymocyte maturation. Additionally it may play a role in receptor-mediated endocytosis at the synapse. . FUNCTION: Calcium-binding protein that interacts with newly synthesized monoglucosylated glycoproteins in the endoplasmic reticulum. It may act in assisting protein assembly and/or in the retention within the ER of unassembled protein subunits. It seems to play a major role in the quality control apparatus of the ER by the retention of incorrectly folded proteins. Associated with partial T-cell antigen receptor complexes that escape the ER of immature thymocytes, it may function as a signaling complex regulating thymocyte maturation. Additionally it may play a role in receptor-mediated endocytosis at the synapse. . FUNCTION: Calcium-binding protein that interacts with newly synthesized monoglucosylated glycoproteins in the endoplasmic reticulum. It may act in assisting protein assembly and/or in the retention within the ER of unassembled protein subunits. It seems to play a major role in the quality control apparatus of the ER by the retention of incorrectly folded proteins. Associated with partial T-cell antigen receptor complexes that escape the ER of immature thymocytes, it may function as a signaling complex regulating thymocyte maturation. Additionally it may play a role in receptor-mediated endocytosis at the synapse. . FUNCTION: Calcium-binding protein that interacts with newly synthesized monoglucosylated glycoproteins in the endoplasmic reticulum. It may act in assisting protein assembly and/or in the retention within the ER of unassembled protein subunits. It seems to play a major role in the quality control apparatus of the ER by the retention of incorrectly folded proteins. Associated with partial T-cell antigen receptor complexes that escape the ER of immature thymocytes, it may function as a signaling complex regulating thymocyte maturation. Additionally it may play a role in receptor-mediated endocytosis at the synapse. . FUNCTION: Calcium-binding protein that interacts with newly synthesized monoglucosylated glycoproteins in the endoplasmic reticulum. It may act in assisting protein assembly and/or in the retention within the ER of unassembled protein subunits. It seems to play a major role in the quality control apparatus of the ER by the retention of incorrectly folded proteins. Associated with partial T-cell antigen receptor complexes that escape the ER of immature thymocytes, it may function as a signaling complex regulating thymocyte maturation. Additionally it may play a role in receptor-mediated endocytosis at the synapse. . FUNCTION: Calcium-binding protein that interacts with newly synthesized monoglucosylated glycoproteins in the endoplasmic reticulum. It may act in assisting protein assembly and/or in the retention within the ER of unassembled protein subunits. It seems to play a major role in the quality control apparatus of the ER by the retention of incorrectly folded proteins. Associated with partial T-cell antigen receptor complexes that escape the ER of immature thymocytes, it may function as a signaling complex regulating thymocyte maturation. Additionally it may play a role in receptor-mediated endocytosis at the synapse. . FUNCTION: Calcium-binding protein that interacts with newly synthesized monoglucosylated glycoproteins in the endoplasmic reticulum. It may act in assisting protein assembly and/or in the retention within the ER of unassembled protein subunits. It seems to play a major role in the quality control apparatus of the ER by the retention of incorrectly folded proteins. Associated with partial T-cell antigen receptor complexes that escape the ER of immature thymocytes, it may function as a signaling complex regulating thymocyte maturation. Additionally it may play a role in receptor-mediated endocytosis at the synapse. . FUNCTION: Calcium-binding protein that interacts with newly synthesized monoglucosylated glycoproteins in the endoplasmic reticulum. It may act in assisting protein assembly and/or in the retention within the ER of unassembled protein subunits. It seems to play a major role in the quality control apparatus of the ER by the retention of incorrectly folded proteins. Associated with partial T-cell antigen receptor complexes that escape the ER of immature thymocytes, it may function as a signaling complex regulating thymocyte maturation. Additionally it may play a role in receptor-mediated endocytosis at the synapse. . FUNCTION: Calcium-binding protein that interacts with newly synthesized monoglucosylated glycoproteins in the endoplasmic reticulum. It may act in assisting protein assembly and/or in the retention within the ER of unassembled protein subunits. It seems to play a major role in the quality control apparatus of the ER by the retention of incorrectly folded proteins. Associated with partial T-cell antigen receptor complexes that escape the ER of immature thymocytes, it may function as a signaling complex regulating thymocyte maturation. Additionally it may play a role in receptor-mediated endocytosis at the synapse. . |
Accessions | ENST00000681072.1 [P27824-1] ENST00000681733.1 [P27824-1] ENST00000680837.1 ENST00000681894.1 ENST00000509563 ENST00000681168.1 [P27824-1] ENST00000513246.6 [P27824-1] ENST00000680406.1 ENST00000680504.1 ENST00000679642.1 ENST00000679527.1 ENST00000680618.1 [P27824-1] D6RAQ8 ENST00000680013.1 [P27824-1] ENST00000639938.1 [P27824-1] A0A7P0TAE9 A0A7P0TB65 D6RAU8 A0A7P0T9S1 ENST00000513246 ENST00000680614.1 P27824 ENST00000680984.1 D6RFL1 D6RFW4 ENST00000502296.6 [P27824-1] ENST00000680042.1 [P27824-1] A0A7P0T9S4 ENST00000681265.1 ENST00000679471.1 ENST00000638425.1 [P27824-1] ENST00000504734.5 [P27824-1] ENST00000681674.1 [P27824-1] ENST00000680894.1 ENST00000514032.5 ENST00000247461.9 [P27824-1] ENST00000680006.1 [P27824-3] A0A7P0TAR9 A0A7P0T8N1 ENST00000506654.6 [P27824-3] ENST00000680827.1 [P27824-3] ENST00000681712.1 [P27824-1] ENST00000681398.1 ENST00000680985.1 D6RD16 A0A7P0TA04 ENST00000681903.1 [P27824-1] ENST00000681762.1 ENST00000681076.1 A0A7P0Z484 A0A7P0Z4D6 A0A7P0T8G1 D6RGY2 ENST00000680092.1 [P27824-1] ENST00000681504.1 ENST00000502673.6 ENST00000506654 A0A7P0T9L0 ENST00000638706.2 [P27824-1] A0A7P0T840 A0A7P0Z4H2 ENST00000452673.6 [P27824-1] ENST00000681476.1 [P27824-1] A0A7P0T937 ENST00000681431.1 A0A7P0TAN9 ENST00000680812.1 ENST00000681576.1 ENST00000502296 ENST00000509563.2 [P27824-1] |