Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 6 studies | 26% ± 11% | |
endothelial cell | 3 studies | 30% ± 12% | |
interneuron | 3 studies | 30% ± 14% | |
oligodendrocyte precursor cell | 3 studies | 20% ± 6% | |
astrocyte | 3 studies | 19% ± 4% | |
glutamatergic neuron | 3 studies | 28% ± 11% | |
abnormal cell | 3 studies | 19% ± 1% | |
goblet cell | 3 studies | 20% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 4243.42 | 1445 / 1445 | 100% | 61.50 | 183 / 183 |
liver | 100% | 2621.31 | 226 / 226 | 100% | 48.15 | 406 / 406 |
ovary | 100% | 6068.09 | 180 / 180 | 100% | 81.02 | 430 / 430 |
pancreas | 100% | 2791.95 | 328 / 328 | 100% | 62.66 | 178 / 178 |
skin | 100% | 3928.26 | 1809 / 1809 | 100% | 88.57 | 472 / 472 |
thymus | 100% | 5680.44 | 653 / 653 | 100% | 92.36 | 605 / 605 |
uterus | 100% | 5466.08 | 170 / 170 | 100% | 97.23 | 459 / 459 |
brain | 100% | 4111.53 | 2636 / 2642 | 100% | 94.88 | 705 / 705 |
breast | 100% | 3995.83 | 459 / 459 | 100% | 72.77 | 1115 / 1118 |
prostate | 100% | 5631.73 | 245 / 245 | 100% | 92.41 | 500 / 502 |
adrenal gland | 100% | 4407.81 | 258 / 258 | 100% | 68.43 | 229 / 230 |
kidney | 100% | 3683.61 | 89 / 89 | 99% | 51.47 | 896 / 901 |
intestine | 100% | 4456.38 | 966 / 966 | 99% | 75.16 | 524 / 527 |
stomach | 100% | 3258.57 | 359 / 359 | 99% | 71.21 | 283 / 286 |
bladder | 100% | 4469.52 | 21 / 21 | 99% | 77.15 | 498 / 504 |
lung | 100% | 3905.65 | 578 / 578 | 99% | 62.06 | 1140 / 1155 |
adipose | 100% | 3642.47 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 79.51 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 115.25 | 29 / 29 |
spleen | 100% | 5297.85 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 84.88 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 45.29 | 1 / 1 |
blood vessel | 100% | 3460.38 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 2402.40 | 801 / 803 | 0% | 0 | 0 / 0 |
heart | 100% | 2890.59 | 857 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 3798.43 | 916 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_1905461 | Biological process | positive regulation of vascular associated smooth muscle cell apoptotic process |
GO_2000204 | Biological process | negative regulation of ribosomal large subunit export from nucleus |
GO_1904706 | Biological process | negative regulation of vascular associated smooth muscle cell proliferation |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0008150 | Biological process | biological_process |
GO_0000398 | Biological process | mRNA splicing, via spliceosome |
GO_1905288 | Biological process | vascular associated smooth muscle cell apoptotic process |
GO_1990874 | Biological process | vascular associated smooth muscle cell proliferation |
GO_0070935 | Biological process | 3'-UTR-mediated mRNA stabilization |
GO_0048025 | Biological process | negative regulation of mRNA splicing, via spliceosome |
GO_0005730 | Cellular component | nucleolus |
GO_0016607 | Cellular component | nuclear speck |
GO_0032991 | Cellular component | protein-containing complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0042802 | Molecular function | identical protein binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0003723 | Molecular function | RNA binding |
GO_0035198 | Molecular function | miRNA binding |
GO_0005515 | Molecular function | protein binding |
Gene name | RBM10 |
Protein name | RNA-binding protein 10 (G patch domain-containing protein 9) (RNA-binding motif protein 10) (RNA-binding protein S1-1) (S1-1) Epididymis secretory sperm binding protein (RNA binding motif protein 10 isoform 1) RBM10 protein RNA binding motif protein 10 isoform 2 Ribosome biogenesis inhibitor MINAS-60 (MINAS-60) |
Synonyms | GPATC9 GPATCH9 DXS8237E KIAA0122 |
Description | FUNCTION: May be involved in post-transcriptional processing, most probably in mRNA splicing. Binds to RNA homopolymers, with a preference for poly(G) and poly(U) and little for poly(A) (By similarity). May bind to specific miRNA hairpins . . FUNCTION: Acts as a late-stage inhibitor of pre-60S ribosome assembly by preventing pre-60S ribosome export from nucleus. . |
Accessions | Q6PKH5 P0DW28 A0A0S2Z4W4 ENST00000345781.10 [P98175-3] ENST00000377604.8 [P98175-1] A0A0S2Z4X1 ENST00000628161.2 [P98175-4] P98175 ENST00000329236.8 [P98175-5] |