Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 6 studies | 22% ± 7% | |
microglial cell | 5 studies | 20% ± 5% | |
astrocyte | 5 studies | 25% ± 6% | |
macrophage | 5 studies | 18% ± 2% | |
epithelial cell | 4 studies | 27% ± 4% | |
glutamatergic neuron | 4 studies | 46% ± 17% | |
oligodendrocyte precursor cell | 4 studies | 31% ± 9% | |
interneuron | 4 studies | 35% ± 20% | |
oligodendrocyte | 4 studies | 20% ± 4% | |
fibroblast | 3 studies | 22% ± 6% | |
GABAergic neuron | 3 studies | 46% ± 4% | |
basal cell | 3 studies | 26% ± 9% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 6 studies | 32% ± 15% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 914.00 | 21 / 21 | 100% | 11.73 | 504 / 504 |
breast | 100% | 1069.24 | 459 / 459 | 100% | 11.79 | 1118 / 1118 |
esophagus | 100% | 770.01 | 1445 / 1445 | 100% | 11.43 | 183 / 183 |
uterus | 100% | 1164.69 | 170 / 170 | 100% | 14.41 | 459 / 459 |
prostate | 100% | 1215.82 | 245 / 245 | 100% | 12.23 | 501 / 502 |
ovary | 100% | 1420.43 | 180 / 180 | 100% | 8.19 | 429 / 430 |
lung | 100% | 761.61 | 576 / 578 | 100% | 11.29 | 1155 / 1155 |
thymus | 100% | 998.87 | 653 / 653 | 100% | 10.09 | 602 / 605 |
stomach | 100% | 572.97 | 359 / 359 | 99% | 9.02 | 284 / 286 |
pancreas | 100% | 434.10 | 328 / 328 | 99% | 9.92 | 176 / 178 |
intestine | 100% | 806.43 | 966 / 966 | 99% | 9.82 | 521 / 527 |
brain | 99% | 672.57 | 2613 / 2642 | 98% | 9.21 | 694 / 705 |
adrenal gland | 100% | 600.13 | 258 / 258 | 96% | 5.48 | 220 / 230 |
kidney | 100% | 674.63 | 89 / 89 | 94% | 7.40 | 851 / 901 |
skin | 100% | 996.33 | 1809 / 1809 | 94% | 7.77 | 444 / 472 |
liver | 100% | 335.59 | 225 / 226 | 91% | 4.98 | 370 / 406 |
adipose | 100% | 866.60 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 10.12 | 29 / 29 |
spleen | 100% | 810.69 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 9.95 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.71 | 1 / 1 |
blood vessel | 100% | 1278.94 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 600.01 | 800 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 468.16 | 834 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 76% | 5.41 | 61 / 80 |
peripheral blood | 46% | 311.57 | 430 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0030488 | Biological process | tRNA methylation |
GO_0005515 | Molecular function | protein binding |
GO_0016423 | Molecular function | tRNA (guanine) methyltransferase activity |
GO_0003723 | Molecular function | RNA binding |
Gene name | THUMPD2 |
Protein name | THUMP domain containing 2 THUMP domain-containing protein 2 |
Synonyms | C2orf8 |
Description | |
Accessions | Q9BTF0 ENST00000378727.8 [Q9BTF0-2] ENST00000505747.6 [Q9BTF0-1] ENST00000530522.1 H0YE26 |