Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 18 studies | 86% ± 15% | |
peripheral blood | 18 studies | 88% ± 14% | |
intestine | 14 studies | 83% ± 23% | |
brain | 12 studies | 35% ± 20% | |
eye | 10 studies | 67% ± 24% | |
kidney | 8 studies | 79% ± 22% | |
liver | 7 studies | 62% ± 30% | |
bone marrow | 5 studies | 94% ± 4% | |
uterus | 5 studies | 92% ± 10% | |
pancreas | 4 studies | 73% ± 26% | |
lymph node | 4 studies | 97% ± 3% | |
placenta | 4 studies | 86% ± 23% | |
heart | 4 studies | 46% ± 19% | |
esophagus | 4 studies | 73% ± 25% | |
prostate | 4 studies | 95% ± 8% | |
breast | 4 studies | 94% ± 4% | |
skin | 3 studies | 81% ± 24% | |
stomach | 3 studies | 56% ± 29% | |
thymus | 3 studies | 74% ± 35% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 28643.68 | 1445 / 1445 | 100% | 577.24 | 183 / 183 |
ovary | 100% | 59602.90 | 180 / 180 | 100% | 861.03 | 430 / 430 |
pancreas | 100% | 27545.16 | 328 / 328 | 100% | 353.80 | 178 / 178 |
breast | 100% | 34982.56 | 459 / 459 | 100% | 328.70 | 1117 / 1118 |
brain | 100% | 17659.23 | 2635 / 2642 | 100% | 351.45 | 705 / 705 |
lung | 100% | 24609.30 | 576 / 578 | 100% | 321.43 | 1155 / 1155 |
stomach | 100% | 23487.15 | 359 / 359 | 100% | 649.25 | 285 / 286 |
bladder | 100% | 34247.00 | 21 / 21 | 100% | 397.23 | 502 / 504 |
prostate | 100% | 28418.59 | 245 / 245 | 100% | 407.77 | 500 / 502 |
uterus | 100% | 37036.82 | 170 / 170 | 100% | 349.94 | 457 / 459 |
intestine | 100% | 31237.69 | 966 / 966 | 99% | 567.90 | 523 / 527 |
thymus | 100% | 24314.26 | 653 / 653 | 99% | 383.29 | 599 / 605 |
skin | 100% | 36054.48 | 1809 / 1809 | 97% | 282.75 | 458 / 472 |
kidney | 100% | 24019.96 | 89 / 89 | 96% | 265.08 | 869 / 901 |
liver | 100% | 11109.69 | 226 / 226 | 94% | 198.14 | 383 / 406 |
adrenal gland | 100% | 19923.40 | 258 / 258 | 88% | 234.89 | 203 / 230 |
adipose | 100% | 30658.28 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 30302.20 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 894.09 | 29 / 29 |
spleen | 100% | 34873.49 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 299.99 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 172.42 | 1 / 1 |
muscle | 100% | 22514.68 | 799 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 441.26 | 79 / 80 |
heart | 98% | 17302.63 | 845 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 86% | 19229.26 | 795 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006412 | Biological process | translation |
GO_0002181 | Biological process | cytoplasmic translation |
GO_0022626 | Cellular component | cytosolic ribosome |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005829 | Cellular component | cytosol |
GO_0045202 | Cellular component | synapse |
GO_0016020 | Cellular component | membrane |
GO_0022625 | Cellular component | cytosolic large ribosomal subunit |
GO_0005737 | Cellular component | cytoplasm |
GO_0003735 | Molecular function | structural constituent of ribosome |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | RPL21 |
Protein name | Large ribosomal subunit protein eL21 (60S ribosomal protein L21) Ribosomal protein L21 60S ribosomal protein L21 |
Synonyms | hCG_2020044 |
Description | FUNCTION: Component of the large ribosomal subunit . The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell . . |
Accessions | M0R181 ENST00000493317.1 G3V1B3 M0R3I5 ENST00000326092.8 Q6IAX2 ENST00000272274.8 ENST00000319826.8 P46778 ENST00000311549.11 ENST00000461690.5 ENST00000483765.5 |