Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2229.02 | 1445 / 1445 | 100% | 59.09 | 183 / 183 |
ovary | 100% | 1757.79 | 180 / 180 | 100% | 79.28 | 430 / 430 |
stomach | 100% | 1714.26 | 359 / 359 | 100% | 65.04 | 286 / 286 |
uterus | 100% | 2167.61 | 170 / 170 | 100% | 84.56 | 459 / 459 |
breast | 100% | 2152.32 | 459 / 459 | 100% | 69.40 | 1116 / 1118 |
intestine | 100% | 1951.31 | 966 / 966 | 100% | 71.57 | 526 / 527 |
skin | 100% | 3104.31 | 1809 / 1809 | 100% | 66.66 | 471 / 472 |
pancreas | 100% | 1319.14 | 327 / 328 | 100% | 49.03 | 178 / 178 |
brain | 100% | 2225.82 | 2633 / 2642 | 100% | 51.40 | 705 / 705 |
liver | 100% | 4862.40 | 226 / 226 | 100% | 41.14 | 404 / 406 |
thymus | 100% | 2207.32 | 653 / 653 | 100% | 53.35 | 602 / 605 |
bladder | 100% | 2388.67 | 21 / 21 | 99% | 77.06 | 501 / 504 |
lung | 99% | 1880.63 | 574 / 578 | 100% | 60.82 | 1154 / 1155 |
prostate | 100% | 2148.73 | 245 / 245 | 99% | 54.66 | 498 / 502 |
kidney | 100% | 3216.20 | 89 / 89 | 98% | 36.26 | 886 / 901 |
adrenal gland | 100% | 2396.47 | 258 / 258 | 95% | 34.30 | 219 / 230 |
adipose | 100% | 2105.92 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 76.71 | 29 / 29 |
spleen | 100% | 1793.21 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 75.10 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 32.94 | 1 / 1 |
blood vessel | 100% | 2133.96 | 1332 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 1810.40 | 800 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 98% | 31.96 | 78 / 80 |
heart | 96% | 1397.25 | 823 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 51% | 1272.74 | 472 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0042273 | Biological process | ribosomal large subunit biogenesis |
GO_0006364 | Biological process | rRNA processing |
GO_0030687 | Cellular component | preribosome, large subunit precursor |
GO_0005730 | Cellular component | nucleolus |
GO_0005694 | Cellular component | chromosome |
GO_0034399 | Cellular component | nuclear periphery |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | EBNA1BP2 |
Protein name | Probable rRNA-processing protein EBP2 (EBNA1-binding protein 2) (Nucleolar protein p40) EBNA1 binding protein 2 EBNA1 binding protein 2 (EBNA1 binding protein 2, isoform CRA_a) (EBNA1BP2 protein) |
Synonyms | EBP2 hCG_2031782 |
Description | FUNCTION: Required for the processing of the 27S pre-rRNA. . FUNCTION: Required for the processing of the 27S pre-rRNA. . FUNCTION: Required for the processing of the 27S pre-rRNA. . |
Accessions | H7C2Q8 Q6IB29 ENST00000236051.3 Q99848 ENST00000431635.6 |