Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 99% | 2184.52 | 1435 / 1445 | 99% | 85.12 | 182 / 183 |
breast | 100% | 1461.02 | 458 / 459 | 98% | 80.86 | 1100 / 1118 |
intestine | 100% | 1795.41 | 963 / 966 | 98% | 62.54 | 518 / 527 |
skin | 100% | 4977.25 | 1800 / 1809 | 98% | 74.68 | 462 / 472 |
bladder | 100% | 1291.29 | 21 / 21 | 97% | 75.06 | 488 / 504 |
stomach | 95% | 1568.23 | 342 / 359 | 100% | 61.74 | 286 / 286 |
lung | 99% | 1894.90 | 575 / 578 | 95% | 67.15 | 1103 / 1155 |
uterus | 94% | 1242.11 | 159 / 170 | 100% | 92.46 | 457 / 459 |
brain | 98% | 1537.59 | 2593 / 2642 | 90% | 36.17 | 635 / 705 |
adrenal gland | 100% | 1547.41 | 258 / 258 | 75% | 25.00 | 173 / 230 |
ovary | 66% | 582.89 | 119 / 180 | 99% | 69.56 | 425 / 430 |
pancreas | 67% | 445.42 | 219 / 328 | 88% | 28.14 | 157 / 178 |
thymus | 99% | 1221.53 | 647 / 653 | 55% | 15.31 | 331 / 605 |
kidney | 100% | 1227.71 | 89 / 89 | 46% | 10.24 | 412 / 901 |
liver | 74% | 937.16 | 167 / 226 | 70% | 23.06 | 284 / 406 |
prostate | 87% | 855.59 | 212 / 245 | 36% | 7.16 | 179 / 502 |
lymph node | 0% | 0 | 0 / 0 | 100% | 95.05 | 29 / 29 |
spleen | 100% | 2868.93 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 94.66 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 30.91 | 1 / 1 |
adipose | 100% | 1755.93 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 98% | 1216.61 | 1309 / 1335 | 0% | 0 | 0 / 0 |
heart | 96% | 1318.20 | 829 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 89% | 4094.35 | 825 / 929 | 0% | 0 | 0 / 0 |
muscle | 88% | 832.45 | 707 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 84% | 21.39 | 67 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0075506 | Biological process | entry of viral genome into host nucleus through nuclear pore complex via importin |
GO_1903902 | Biological process | positive regulation of viral life cycle |
GO_0032481 | Biological process | positive regulation of type I interferon production |
GO_0000018 | Biological process | regulation of DNA recombination |
GO_0006259 | Biological process | DNA metabolic process |
GO_0006606 | Biological process | protein import into nucleus |
GO_0006607 | Biological process | NLS-bearing protein import into nucleus |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0005654 | Cellular component | nucleoplasm |
GO_0000139 | Cellular component | Golgi membrane |
GO_0042564 | Cellular component | NLS-dependent protein nuclear import complex |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0043657 | Cellular component | host cell |
GO_0031965 | Cellular component | nuclear membrane |
GO_0005634 | Cellular component | nucleus |
GO_0008139 | Molecular function | nuclear localization sequence binding |
GO_0061608 | Molecular function | nuclear import signal receptor activity |
GO_0003723 | Molecular function | RNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0042826 | Molecular function | histone deacetylase binding |
Gene name | KPNA2 |
Protein name | Importin subunit alpha Importin subunit alpha-1 Karyopherin subunit alpha 2 Importin subunit alpha-1 (Karyopherin subunit alpha-2) (RAG cohort protein 1) (SRP1-alpha) |
Synonyms | SRP1 RCH1 |
Description | FUNCTION: Functions in nuclear protein import as an adapter protein for nuclear receptor KPNB1. Binds specifically and directly to substrates containing either a simple or bipartite NLS motif. Docking of the importin/substrate complex to the nuclear pore complex (NPC) is mediated by KPNB1 through binding to nucleoporin FxFG repeats and the complex is subsequently translocated through the pore by an energy requiring, Ran-dependent mechanism. At the nucleoplasmic side of the NPC, Ran binds to importin-beta and the three components separate and importin-alpha and -beta are re-exported from the nucleus to the cytoplasm where GTP hydrolysis releases Ran from importin. The directionality of nuclear import is thought to be conferred by an asymmetric distribution of the GTP- and GDP-bound forms of Ran between the cytoplasm and nucleus. FUNCTION: Functions in nuclear protein import. . FUNCTION: Functions in nuclear protein import. . FUNCTION: Functions in nuclear protein import. . FUNCTION: Functions in nuclear protein import. . |
Accessions | ENST00000584026.6 ENST00000679078.1 ENST00000579754.2 ENST00000677827.1 ENST00000677086.1 ENST00000537025.6 A0A7I2V487 A0A7I2YQE1 ENST00000584026 Q7Z726 ENST00000583269.5 ENST00000579754 ENST00000678388.1 J3QLL0 ENST00000676857.1 A0A7I2V351 P52292 ENST00000330459.8 J3KS65 A0A7I2V3Z3 J3QL07 ENST00000676594.1 |