Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 5 studies | 26% ± 9% | |
dendritic cell | 3 studies | 19% ± 2% |
Insufficient scRNA-seq data for expression of RRP1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1718.28 | 1445 / 1445 | 100% | 24.38 | 183 / 183 |
ovary | 100% | 1588.37 | 180 / 180 | 100% | 25.94 | 430 / 430 |
pancreas | 100% | 1018.01 | 328 / 328 | 100% | 27.67 | 178 / 178 |
skin | 100% | 2253.07 | 1809 / 1809 | 100% | 46.67 | 472 / 472 |
uterus | 100% | 1480.35 | 170 / 170 | 100% | 51.21 | 459 / 459 |
brain | 100% | 1397.72 | 2634 / 2642 | 100% | 32.28 | 705 / 705 |
thymus | 100% | 1360.61 | 653 / 653 | 100% | 26.14 | 602 / 605 |
prostate | 100% | 1649.78 | 245 / 245 | 99% | 31.18 | 499 / 502 |
liver | 100% | 1373.98 | 226 / 226 | 99% | 22.15 | 403 / 406 |
intestine | 100% | 1201.00 | 966 / 966 | 99% | 34.24 | 523 / 527 |
bladder | 100% | 1454.48 | 21 / 21 | 99% | 46.76 | 500 / 504 |
breast | 100% | 1493.53 | 459 / 459 | 99% | 31.12 | 1105 / 1118 |
lung | 100% | 1233.51 | 576 / 578 | 99% | 29.49 | 1144 / 1155 |
stomach | 100% | 1123.56 | 359 / 359 | 98% | 28.68 | 280 / 286 |
adrenal gland | 100% | 1457.86 | 258 / 258 | 98% | 21.03 | 225 / 230 |
kidney | 100% | 1131.64 | 89 / 89 | 98% | 18.26 | 881 / 901 |
adipose | 100% | 1459.63 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 60.55 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 71.18 | 29 / 29 |
muscle | 100% | 1322.44 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1653.75 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 51.61 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 37.47 | 1 / 1 |
blood vessel | 100% | 970.83 | 1332 / 1335 | 0% | 0 | 0 / 0 |
heart | 97% | 756.88 | 833 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 85% | 1162.82 | 792 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006364 | Biological process | rRNA processing |
GO_0005730 | Cellular component | nucleolus |
GO_0005694 | Cellular component | chromosome |
GO_0030688 | Cellular component | preribosome, small subunit precursor |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | RRP1 |
Protein name | Ribosomal RNA processing protein 1 homolog A (Novel nuclear protein 1) (NNP-1) (Nucleolar protein Nop52) (RRP1-like protein) RRP1 protein Ribosomal RNA processing 1 |
Synonyms | RRP1A NNP1 NOP52 NNP-1 D21S2056E |
Description | FUNCTION: Plays a critical role in the generation of 28S rRNA. . |
Accessions | ENST00000497547.2 Q6PJJ2 ENST00000483896.5 P56182 D6RE82 |