RPL3 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
B cell	50 studies	91% ± 19%	Explore
macrophage	43 studies	78% ± 23%	Explore
natural killer cell	43 studies	92% ± 13%	Explore
endothelial cell	43 studies	77% ± 25%	Explore
fibroblast	41 studies	83% ± 26%	Explore
T cell	40 studies	84% ± 23%	Explore
CD8-positive, alpha-beta T cell	39 studies	90% ± 16%	Explore
CD4-positive, alpha-beta T cell	36 studies	92% ± 14%	Explore
pericyte	35 studies	83% ± 25%	Explore
conventional dendritic cell	30 studies	95% ± 6%	Explore
plasmacytoid dendritic cell	30 studies	95% ± 7%	Explore
smooth muscle cell	29 studies	84% ± 25%	Explore
dendritic cell	28 studies	87% ± 19%	Explore
plasma cell	27 studies	86% ± 21%	Explore
epithelial cell	27 studies	80% ± 27%	Explore
endothelial cell of lymphatic vessel	26 studies	83% ± 25%	Explore
classical monocyte	26 studies	82% ± 15%	Explore
regulatory T cell	26 studies	95% ± 10%	Explore
non-classical monocyte	25 studies	87% ± 12%	Explore
mature NK T cell	24 studies	89% ± 16%	Explore
mast cell	23 studies	85% ± 15%	Explore
monocyte	23 studies	79% ± 22%	Explore
gamma-delta T cell	21 studies	95% ± 9%	Explore
memory B cell	21 studies	97% ± 5%	Explore
basal cell	21 studies	91% ± 15%	Explore
connective tissue cell	19 studies	89% ± 21%	Explore
naive B cell	18 studies	96% ± 6%	Explore
mucosal invariant T cell	17 studies	95% ± 10%	Explore
capillary endothelial cell	17 studies	74% ± 21%	Explore
ciliated cell	16 studies	81% ± 16%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	16 studies	95% ± 11%	Explore
endothelial cell of artery	16 studies	83% ± 13%	Explore
CD16-negative, CD56-bright natural killer cell, human	15 studies	90% ± 15%	Explore
CD16-positive, CD56-dim natural killer cell, human	15 studies	91% ± 9%	Explore
vein endothelial cell	15 studies	83% ± 20%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	14 studies	99% ± 1%	Explore
myofibroblast cell	14 studies	90% ± 19%	Explore
myeloid cell	14 studies	81% ± 23%	Explore
CD8-positive, alpha-beta memory T cell	13 studies	94% ± 11%	Explore
erythrocyte	13 studies	63% ± 24%	Explore
effector memory CD8-positive, alpha-beta T cell	12 studies	87% ± 19%	Explore
innate lymphoid cell	12 studies	96% ± 5%	Explore
plasmablast	12 studies	95% ± 5%	Explore
CD4-positive, alpha-beta memory T cell	12 studies	93% ± 10%	Explore
secretory cell	12 studies	91% ± 14%	Explore
microglial cell	12 studies	62% ± 29%	Explore
goblet cell	12 studies	80% ± 23%	Explore
mesothelial cell	12 studies	88% ± 17%	Explore
endothelial cell of vascular tree	12 studies	88% ± 21%	Explore
astrocyte	11 studies	45% ± 24%	Explore
leukocyte	11 studies	84% ± 22%	Explore
T follicular helper cell	10 studies	98% ± 2%	Explore
progenitor cell	10 studies	94% ± 11%	Explore
IgG plasma cell	10 studies	89% ± 14%	Explore
type I pneumocyte	9 studies	70% ± 25%	Explore
type II pneumocyte	9 studies	84% ± 21%	Explore
club cell	9 studies	81% ± 28%	Explore
neutrophil	9 studies	71% ± 15%	Explore
glutamatergic neuron	9 studies	32% ± 13%	Explore
neuron	9 studies	66% ± 26%	Explore
IgA plasma cell	9 studies	87% ± 18%	Explore
hematopoietic stem cell	9 studies	90% ± 23%	Explore
respiratory goblet cell	8 studies	72% ± 27%	Explore
platelet	8 studies	53% ± 25%	Explore
oligodendrocyte precursor cell	8 studies	43% ± 26%	Explore
abnormal cell	8 studies	81% ± 24%	Explore
enterocyte	8 studies	77% ± 18%	Explore
enteroendocrine cell	8 studies	85% ± 26%	Explore
mononuclear phagocyte	7 studies	81% ± 23%	Explore
GABAergic neuron	7 studies	31% ± 9%	Explore
oligodendrocyte	7 studies	31% ± 6%	Explore
epithelial cell of proximal tubule	7 studies	86% ± 14%	Explore
transit amplifying cell	7 studies	79% ± 27%	Explore
retinal cone cell	7 studies	63% ± 29%	Explore
retinal rod cell	7 studies	67% ± 24%	Explore
alveolar macrophage	6 studies	80% ± 25%	Explore
ionocyte	6 studies	88% ± 16%	Explore
kidney loop of Henle epithelial cell	6 studies	89% ± 15%	Explore
renal alpha-intercalated cell	6 studies	99% ± 1%	Explore
erythroblast	6 studies	75% ± 22%	Explore
intestinal crypt stem cell	6 studies	78% ± 30%	Explore
amacrine cell	6 studies	61% ± 22%	Explore
retinal ganglion cell	6 studies	73% ± 23%	Explore
precursor B cell	6 studies	97% ± 4%	Explore
brush cell	6 studies	87% ± 14%	Explore
glial cell	6 studies	75% ± 26%	Explore
immature B cell	6 studies	98% ± 2%	Explore
effector memory CD4-positive, alpha-beta T cell	6 studies	98% ± 3%	Explore
effector CD8-positive, alpha-beta T cell	6 studies	95% ± 8%	Explore
CD4-positive helper T cell	5 studies	96% ± 3%	Explore
central memory CD8-positive, alpha-beta T cell	5 studies	98% ± 3%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	5 studies	94% ± 4%	Explore
hematopoietic precursor cell	5 studies	94% ± 8%	Explore
kidney distal convoluted tubule epithelial cell	5 studies	96% ± 3%	Explore
megakaryocyte	5 studies	76% ± 18%	Explore
OFF-bipolar cell	5 studies	75% ± 26%	Explore
ON-bipolar cell	5 studies	74% ± 26%	Explore
lymphocyte	5 studies	85% ± 26%	Explore
T-helper 17 cell	5 studies	99% ± 1%	Explore
group 3 innate lymphoid cell	5 studies	98% ± 2%	Explore
Mueller cell	5 studies	69% ± 22%	Explore
double negative thymocyte	5 studies	97% ± 3%	Explore
effector CD4-positive, alpha-beta T cell	5 studies	96% ± 6%	Explore
granulocyte	5 studies	93% ± 9%	Explore
intermediate monocyte	5 studies	79% ± 16%	Explore
melanocyte	5 studies	75% ± 27%	Explore
CD4-positive, alpha-beta cytotoxic T cell	4 studies	85% ± 18%	Explore
deuterosomal cell	4 studies	77% ± 23%	Explore
duct epithelial cell	4 studies	98% ± 2%	Explore
exhausted T cell	4 studies	91% ± 10%	Explore
precursor cell	4 studies	85% ± 23%	Explore
pancreatic A cell	4 studies	96% ± 6%	Explore
type B pancreatic cell	4 studies	95% ± 6%	Explore
cholangiocyte	4 studies	44% ± 33%	Explore
endothelial cell of sinusoid	4 studies	53% ± 30%	Explore
glomerular endothelial cell	4 studies	82% ± 13%	Explore
kidney connecting tubule epithelial cell	4 studies	96% ± 3%	Explore
podocyte	4 studies	91% ± 7%	Explore
paneth cell	4 studies	88% ± 13%	Explore
GABAergic amacrine cell	4 studies	60% ± 25%	Explore
glycinergic amacrine cell	4 studies	59% ± 26%	Explore
pro-B cell	4 studies	98% ± 1%	Explore
neuroendocrine cell	4 studies	99% ± 1%	Explore
adventitial cell	4 studies	87% ± 15%	Explore
mucus secreting cell	4 studies	81% ± 32%	Explore
retina horizontal cell	4 studies	61% ± 22%	Explore
inflammatory macrophage	4 studies	77% ± 19%	Explore
acinar cell	4 studies	83% ± 20%	Explore
muscle cell	4 studies	56% ± 20%	Explore
germinal center B cell	4 studies	98% ± 1%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	98% ± 4%	Explore
hepatocyte	4 studies	65% ± 29%	Explore
IgM plasma cell	4 studies	96% ± 2%	Explore
megakaryocyte-erythroid progenitor cell	4 studies	80% ± 34%	Explore
interneuron	4 studies	55% ± 24%	Explore
T-helper 1 cell	4 studies	99% ± 0%	Explore
squamous epithelial cell	3 studies	50% ± 25%	Explore
pancreatic D cell	3 studies	98% ± 2%	Explore
renal beta-intercalated cell	3 studies	99% ± 1%	Explore
neural crest cell	3 studies	100% ± 0%	Explore
retinal bipolar neuron	3 studies	71% ± 25%	Explore
renal principal cell	3 studies	92% ± 2%	Explore
thymocyte	3 studies	100% ± 0%	Explore
extravillous trophoblast	3 studies	100% ± 0%	Explore
placental villous trophoblast	3 studies	99% ± 1%	Explore
common myeloid progenitor	3 studies	70% ± 37%	Explore
Schwann cell	3 studies	73% ± 32%	Explore
serous secreting cell	3 studies	85% ± 7%	Explore
tissue-resident macrophage	3 studies	72% ± 31%	Explore
follicular B cell	3 studies	99% ± 1%	Explore
intraepithelial lymphocyte	3 studies	98% ± 1%	Explore
rod bipolar cell	3 studies	85% ± 13%	Explore
chondrocyte	3 studies	65% ± 27%	Explore
myoepithelial cell	3 studies	99% ± 1%	Explore
luminal cell of prostate epithelium	3 studies	100% ± 0%	Explore
retinal pigment epithelial cell	3 studies	58% ± 22%	Explore
pancreatic ductal cell	3 studies	92% ± 4%	Explore
granulocyte monocyte progenitor cell	3 studies	79% ± 27%	Explore
keratinocyte	3 studies	98% ± 3%	Explore
central memory CD4-positive, alpha-beta T cell	3 studies	98% ± 1%	Explore
double-positive, alpha-beta thymocyte	3 studies	98% ± 1%	Explore
progenitor cell of mammary luminal epithelium	3 studies	100% ± 0%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
lung	19 studies	79% ± 21%	Explore
peripheral blood	19 studies	89% ± 13%	Explore
brain	15 studies	38% ± 20%	Explore
intestine	14 studies	84% ± 23%	Explore
eye	10 studies	71% ± 22%	Explore
kidney	8 studies	83% ± 19%	Explore
liver	7 studies	66% ± 23%	Explore
pancreas	5 studies	88% ± 15%	Explore
bone marrow	5 studies	91% ± 9%	Explore
uterus	5 studies	91% ± 15%	Explore
lymph node	4 studies	98% ± 2%	Explore
placenta	4 studies	89% ± 15%	Explore
heart	4 studies	45% ± 20%	Explore
esophagus	4 studies	75% ± 23%	Explore
prostate	4 studies	92% ± 13%	Explore
breast	4 studies	97% ± 3%	Explore
adipose	3 studies	56% ± 29%	Explore
skin	3 studies	82% ± 22%	Explore
stomach	3 studies	65% ± 21%	Explore
thymus	3 studies	84% ± 22%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	112911.65	1445 / 1445	100%	765.65	183 / 183
pancreas	100%	140347.24	328 / 328	100%	1386.27	178 / 178
thymus	100%	101869.70	653 / 653	100%	2196.74	605 / 605
uterus	100%	143642.09	170 / 170	100%	1367.87	458 / 459
kidney	100%	89439.97	89 / 89	100%	1352.80	898 / 901
prostate	100%	131832.17	245 / 245	100%	2804.38	500 / 502
liver	100%	55641.03	225 / 226	100%	1054.73	406 / 406
ovary	100%	260917.64	180 / 180	100%	1153.48	428 / 430
intestine	100%	109099.08	966 / 966	99%	1642.47	523 / 527
bladder	100%	117369.14	21 / 21	99%	1425.71	500 / 504
brain	99%	51137.32	2621 / 2642	100%	1182.07	705 / 705
skin	99%	166895.07	1791 / 1809	100%	1770.62	472 / 472
stomach	100%	89601.88	359 / 359	99%	1238.93	283 / 286
lung	100%	85279.32	576 / 578	99%	1182.12	1146 / 1155
breast	100%	134397.59	459 / 459	99%	1518.08	1103 / 1118
adrenal gland	100%	103458.35	258 / 258	97%	1084.83	223 / 230
adipose	100%	117085.22	1204 / 1204	0%	0	0 / 0
eye	0%	0	0 / 0	100%	3815.06	80 / 80
lymph node	0%	0	0 / 0	100%	2501.69	29 / 29
spleen	100%	104688.61	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	1274.84	45 / 45
ureter	0%	0	0 / 0	100%	1046.75	1 / 1
blood vessel	100%	91480.16	1334 / 1335	0%	0	0 / 0
peripheral blood	94%	85174.86	875 / 929	0%	0	0 / 0
heart	78%	36527.89	671 / 861	0%	0	0 / 0
muscle	44%	13820.53	355 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

GO_0006412	Biological process	translation
GO_0071353	Biological process	cellular response to interleukin-4
GO_0002181	Biological process	cytoplasmic translation
GO_0005730	Cellular component	nucleolus
GO_0022626	Cellular component	cytosolic ribosome
GO_0070062	Cellular component	extracellular exosome
GO_0032991	Cellular component	protein-containing complex
GO_0005829	Cellular component	cytosol
GO_0005925	Cellular component	focal adhesion
GO_0022625	Cellular component	cytosolic large ribosomal subunit
GO_0005737	Cellular component	cytoplasm
GO_0005634	Cellular component	nucleus
GO_0003735	Molecular function	structural constituent of ribosome
GO_0005515	Molecular function	protein binding
GO_0003723	Molecular function	RNA binding

Gene name	RPL3
Protein name	Large ribosomal subunit protein uL3 (60S ribosomal protein L3) (HIV-1 TAR RNA-binding protein B) (TARBP-B) 60S ribosomal protein L3 Large ribosomal subunit protein uL3 (60S ribosomal protein L3)
Synonyms	ASC-1 OK/SW-cl.32 hCG_2015191
Description	FUNCTION: Component of the large ribosomal subunit . The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell . .
Accessions	B4DN06 H7C3M2 Q9BT63 F8WCR1 P39023 ENST00000401609.5 ENST00000427905.5 B5MCW2 Q96QL0 ENST00000420536.1 Q49AJ9 H7C422 ENST00000402527.5 ENST00000453303.5 ENST00000216146.9 G5E9G0

RPL3 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review