Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 12635.65 | 1445 / 1445 | 100% | 375.20 | 183 / 183 |
intestine | 100% | 11195.52 | 966 / 966 | 100% | 388.61 | 527 / 527 |
ovary | 100% | 9274.06 | 180 / 180 | 100% | 545.63 | 430 / 430 |
stomach | 100% | 8523.58 | 359 / 359 | 100% | 361.94 | 286 / 286 |
lung | 100% | 12695.93 | 578 / 578 | 100% | 392.05 | 1154 / 1155 |
brain | 100% | 7513.42 | 2637 / 2642 | 100% | 223.48 | 705 / 705 |
uterus | 100% | 9959.19 | 170 / 170 | 100% | 475.90 | 458 / 459 |
liver | 100% | 11659.86 | 226 / 226 | 100% | 313.51 | 405 / 406 |
breast | 100% | 10502.01 | 459 / 459 | 100% | 433.65 | 1115 / 1118 |
bladder | 100% | 9193.19 | 21 / 21 | 100% | 383.66 | 502 / 504 |
skin | 100% | 17716.21 | 1809 / 1809 | 100% | 270.93 | 470 / 472 |
prostate | 100% | 9526.74 | 245 / 245 | 99% | 195.41 | 498 / 502 |
pancreas | 100% | 5619.55 | 327 / 328 | 99% | 304.94 | 177 / 178 |
thymus | 100% | 10917.42 | 653 / 653 | 99% | 251.87 | 598 / 605 |
kidney | 100% | 12801.65 | 89 / 89 | 92% | 212.34 | 826 / 901 |
adrenal gland | 100% | 9316.78 | 258 / 258 | 83% | 104.83 | 191 / 230 |
adipose | 100% | 9892.11 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 279.65 | 29 / 29 |
muscle | 100% | 14724.77 | 803 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 100% | 12462.15 | 929 / 929 | 0% | 0 | 0 / 0 |
spleen | 100% | 8440.33 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 419.36 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 175.99 | 1 / 1 |
blood vessel | 100% | 9110.45 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 7727.98 | 844 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 98% | 143.29 | 78 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007165 | Biological process | signal transduction |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0006338 | Biological process | chromatin remodeling |
GO_0034504 | Biological process | protein localization to nucleus |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0005615 | Cellular component | extracellular space |
GO_0005576 | Cellular component | extracellular region |
GO_0005654 | Cellular component | nucleoplasm |
GO_0062023 | Cellular component | collagen-containing extracellular matrix |
GO_0017053 | Cellular component | transcription repressor complex |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0008201 | Molecular function | heparin binding |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0001227 | Molecular function | DNA-binding transcription repressor activity, RNA polymerase II-specific |
GO_0003714 | Molecular function | transcription corepressor activity |
GO_0001222 | Molecular function | transcription corepressor binding |
GO_0008083 | Molecular function | growth factor activity |
GO_0000166 | Molecular function | nucleotide binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | HDGF |
Protein name | Hepatoma-derived growth factor 4a Heparin binding growth factor Hepatoma-derived growth factor (HDGF) (High mobility group protein 1-like 2) (HMG-1L2) Hepatoma-derived growth factor 4b |
Synonyms | HMG1L2 |
Description | FUNCTION: [Isoform 1]: Acts as a transcriptional repressor . Has mitogenic activity for fibroblasts . Heparin-binding protein . .; FUNCTION: [Isoform 2]: Does not have mitogenic activity for fibroblasts . Does not bind heparin . .; FUNCTION: [Isoform 3]: Has mitogenic activity for fibroblasts . Heparin-binding protein . . |
Accessions | Q7Z4S4 P51858 ENST00000710272.1 ENST00000368209.9 [P51858-2] A0AA34QVG5 ENST00000368206.5 [P51858-3] ENST00000357325.10 [P51858-1] Q7Z4S5 |