KHDC1 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
GABAergic neuron	5 studies	35% ± 12%	Explore
glutamatergic neuron	4 studies	47% ± 16%	Explore
oligodendrocyte precursor cell	3 studies	30% ± 3%	Explore
astrocyte	3 studies	20% ± 4%	Explore
interneuron	3 studies	42% ± 20%	Explore
neuron	3 studies	21% ± 3%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	5 studies	31% ± 16%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	100%	640.84	2641 / 2642	99%	4.92	701 / 705
thymus	100%	380.29	652 / 653	94%	3.52	570 / 605
uterus	100%	260.09	170 / 170	86%	3.56	393 / 459
pancreas	99%	174.23	325 / 328	84%	1.65	149 / 178
ovary	100%	258.19	180 / 180	81%	3.16	350 / 430
esophagus	91%	148.39	1310 / 1445	89%	3.08	162 / 183
prostate	100%	275.51	244 / 245	73%	1.80	368 / 502
lung	75%	95.90	436 / 578	83%	2.74	958 / 1155
bladder	100%	199.24	21 / 21	43%	1.33	218 / 504
stomach	99%	166.40	354 / 359	38%	0.95	109 / 286
intestine	89%	119.37	855 / 966	33%	0.76	176 / 527
breast	53%	55.44	244 / 459	50%	1.35	555 / 1118
blood vessel	97%	212.08	1290 / 1335	0%	0	0 / 0
kidney	51%	57.51	45 / 89	44%	0.93	399 / 901
tonsil	0%	0	0 / 0	89%	2.72	40 / 45
spleen	87%	97.90	209 / 241	0%	0	0 / 0
lymph node	0%	0	0 / 0	86%	2.65	25 / 29
adrenal gland	16%	15.35	42 / 258	69%	2.34	158 / 230
skin	47%	96.69	853 / 1809	24%	0.50	113 / 472
heart	63%	92.89	544 / 861	0%	0	0 / 0
adipose	41%	40.22	493 / 1204	0%	0	0 / 0
eye	0%	0	0 / 0	26%	0.40	21 / 80
peripheral blood	22%	46.49	208 / 929	0%	0	0 / 0
liver	0%	0	0 / 226	8%	0.20	32 / 406
muscle	5%	4.29	42 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1