Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 4 studies | 27% ± 7% | |
GABAergic neuron | 3 studies | 28% ± 6% | |
glutamatergic neuron | 3 studies | 42% ± 7% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 32% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 744.79 | 1445 / 1445 | 100% | 7.88 | 183 / 183 |
brain | 100% | 1327.55 | 2639 / 2642 | 100% | 11.15 | 705 / 705 |
breast | 100% | 912.77 | 459 / 459 | 100% | 7.33 | 1114 / 1118 |
prostate | 100% | 1026.98 | 245 / 245 | 99% | 6.09 | 499 / 502 |
thymus | 100% | 1039.43 | 653 / 653 | 99% | 7.00 | 600 / 605 |
lung | 100% | 764.35 | 577 / 578 | 99% | 7.08 | 1147 / 1155 |
uterus | 100% | 1030.82 | 170 / 170 | 99% | 6.26 | 454 / 459 |
ovary | 100% | 1012.26 | 180 / 180 | 99% | 6.75 | 425 / 430 |
pancreas | 100% | 569.02 | 328 / 328 | 98% | 5.43 | 175 / 178 |
stomach | 100% | 692.52 | 359 / 359 | 98% | 6.21 | 281 / 286 |
intestine | 100% | 872.55 | 966 / 966 | 98% | 5.86 | 517 / 527 |
bladder | 100% | 740.33 | 21 / 21 | 98% | 5.62 | 494 / 504 |
kidney | 100% | 704.57 | 89 / 89 | 97% | 6.14 | 872 / 901 |
adrenal gland | 100% | 924.10 | 258 / 258 | 95% | 5.58 | 219 / 230 |
skin | 100% | 818.88 | 1807 / 1809 | 95% | 7.59 | 447 / 472 |
liver | 100% | 594.69 | 226 / 226 | 82% | 3.18 | 331 / 406 |
adipose | 100% | 875.42 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 6.58 | 29 / 29 |
spleen | 100% | 1368.86 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 6.44 | 45 / 45 |
muscle | 100% | 837.51 | 802 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 670.98 | 1329 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 612.17 | 845 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 88% | 548.54 | 817 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 80% | 3.76 | 64 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0008380 | Biological process | RNA splicing |
GO_0006397 | Biological process | mRNA processing |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005681 | Cellular component | spliceosomal complex |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | RBM48 |
Protein name | RNA-binding protein 48 |
Synonyms | C7orf64 HSPC304 |
Description | FUNCTION: As a component of the minor spliceosome, involved in the splicing of U12-type introns in pre-mRNAs. . FUNCTION: As a component of the minor spliceosome, involved in the splicing of U12-type introns in pre-mRNAs. . |
Accessions | ENST00000481551.5 [Q5RL73-2] ENST00000496410.1 ENST00000265732.10 [Q5RL73-1] C9J787 Q5RL73 |