Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 20 studies | 36% ± 16% | |
peripheral blood | 19 studies | 49% ± 13% | |
intestine | 10 studies | 28% ± 12% | |
kidney | 6 studies | 35% ± 11% | |
heart | 5 studies | 20% ± 4% | |
uterus | 5 studies | 49% ± 23% | |
adipose | 5 studies | 44% ± 16% | |
breast | 5 studies | 39% ± 13% | |
liver | 5 studies | 24% ± 8% | |
placenta | 4 studies | 40% ± 23% | |
esophagus | 4 studies | 43% ± 20% | |
prostate | 4 studies | 21% ± 4% | |
bone marrow | 3 studies | 45% ± 12% | |
skin | 3 studies | 53% ± 19% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 195975.96 | 1445 / 1445 | 99% | 216.47 | 182 / 183 |
breast | 100% | 153512.33 | 459 / 459 | 98% | 285.34 | 1099 / 1118 |
prostate | 99% | 81064.73 | 242 / 245 | 98% | 180.98 | 494 / 502 |
uterus | 100% | 165129.02 | 170 / 170 | 93% | 158.75 | 428 / 459 |
lung | 100% | 117002.25 | 577 / 578 | 90% | 136.96 | 1043 / 1155 |
ovary | 99% | 97044.82 | 179 / 180 | 90% | 98.04 | 385 / 430 |
skin | 100% | 204894.02 | 1809 / 1809 | 88% | 120.50 | 417 / 472 |
bladder | 100% | 122174.81 | 21 / 21 | 86% | 110.78 | 433 / 504 |
kidney | 89% | 44598.90 | 79 / 89 | 97% | 218.92 | 873 / 901 |
thymus | 97% | 60791.14 | 632 / 653 | 89% | 113.31 | 536 / 605 |
intestine | 100% | 177362.44 | 966 / 966 | 83% | 94.04 | 440 / 527 |
stomach | 94% | 96966.68 | 338 / 359 | 86% | 102.35 | 246 / 286 |
pancreas | 11% | 4076.53 | 37 / 328 | 97% | 182.02 | 172 / 178 |
adipose | 100% | 169310.67 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 170971.69 | 1335 / 1335 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 84.18 | 1 / 1 |
muscle | 99% | 88406.06 | 795 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 239.90 | 43 / 45 |
spleen | 95% | 51282.39 | 229 / 241 | 0% | 0 | 0 / 0 |
heart | 91% | 56847.00 | 785 / 861 | 0% | 0 | 0 / 0 |
brain | 11% | 3990.53 | 295 / 2642 | 78% | 76.64 | 552 / 705 |
liver | 8% | 2766.88 | 19 / 226 | 75% | 59.88 | 305 / 406 |
eye | 0% | 0 | 0 / 0 | 81% | 60.59 | 65 / 80 |
adrenal gland | 33% | 12527.74 | 86 / 258 | 43% | 28.89 | 98 / 230 |
lymph node | 0% | 0 | 0 / 0 | 55% | 52.06 | 16 / 29 |
peripheral blood | 12% | 4744.59 | 115 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_1901385 | Biological process | regulation of voltage-gated calcium channel activity |
GO_1905686 | Biological process | positive regulation of plasma membrane repair |
GO_0043484 | Biological process | regulation of RNA splicing |
GO_0005886 | Cellular component | plasma membrane |
GO_0045121 | Cellular component | membrane raft |
GO_0043034 | Cellular component | costamere |
GO_0016020 | Cellular component | membrane |
GO_0042383 | Cellular component | sarcolemma |
GO_0070062 | Cellular component | extracellular exosome |
GO_0044291 | Cellular component | cell-cell contact zone |
GO_0005925 | Cellular component | focal adhesion |
GO_0030315 | Cellular component | T-tubule |
GO_0015629 | Cellular component | actin cytoskeleton |
GO_0005829 | Cellular component | cytosol |
GO_0098797 | Cellular component | plasma membrane protein complex |
GO_0005737 | Cellular component | cytoplasm |
GO_0031982 | Cellular component | vesicle |
GO_0005765 | Cellular component | lysosomal membrane |
GO_0005634 | Cellular component | nucleus |
GO_0045296 | Molecular function | cadherin binding |
GO_0097493 | Molecular function | structural molecule activity conferring elasticity |
GO_0003723 | Molecular function | RNA binding |
GO_0044548 | Molecular function | S100 protein binding |
GO_0005515 | Molecular function | protein binding |
Gene name | AHNAK |
Protein name | Neuroblast differentiation-associated protein AHNAK (Desmoyokin) AHNAK protein AHNAK nucleoprotein |
Synonyms | PM227 |
Description | FUNCTION: May be required for neuronal cell differentiation. |
Accessions | Q09666 E9PKR9 Q96EC4 ENST00000257247.11 [Q09666-2] Q9BVU3 E9PJC6 E9PQE3 ENST00000533365.5 E9PJZ0 ENST00000378024.9 [Q09666-1] E9PLK4 ENST00000530285.5 ENST00000531324.1 ENST00000530124.5 ENST00000528508.5 |