Name | Number of supported studies | Average coverage | |
---|---|---|---|
macrophage | 8 studies | 24% ± 7% | |
classical monocyte | 6 studies | 17% ± 2% | |
epithelial cell | 5 studies | 31% ± 13% | |
dendritic cell | 5 studies | 22% ± 5% | |
endothelial cell | 4 studies | 22% ± 8% | |
fibroblast | 4 studies | 19% ± 3% | |
luminal hormone-sensing cell of mammary gland | 4 studies | 19% ± 2% | |
GABAergic neuron | 4 studies | 37% ± 16% | |
astrocyte | 4 studies | 22% ± 5% | |
glutamatergic neuron | 4 studies | 48% ± 18% | |
basal cell | 4 studies | 26% ± 7% | |
conventional dendritic cell | 3 studies | 22% ± 2% | |
non-classical monocyte | 3 studies | 17% ± 1% | |
ciliated cell | 3 studies | 21% ± 5% | |
oligodendrocyte precursor cell | 3 studies | 25% ± 4% | |
intestinal crypt stem cell | 3 studies | 17% ± 1% | |
transit amplifying cell | 3 studies | 23% ± 4% | |
interneuron | 3 studies | 34% ± 23% | |
neuron | 3 studies | 26% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 100% | 909.86 | 578 / 578 | 100% | 31.48 | 1155 / 1155 |
esophagus | 100% | 886.09 | 1444 / 1445 | 100% | 32.18 | 183 / 183 |
brain | 100% | 969.88 | 2640 / 2642 | 100% | 30.40 | 705 / 705 |
breast | 100% | 1237.95 | 459 / 459 | 100% | 38.08 | 1117 / 1118 |
stomach | 100% | 516.60 | 359 / 359 | 100% | 27.37 | 285 / 286 |
ovary | 100% | 591.79 | 180 / 180 | 100% | 15.61 | 428 / 430 |
bladder | 100% | 855.33 | 21 / 21 | 99% | 36.05 | 501 / 504 |
uterus | 100% | 1102.73 | 170 / 170 | 99% | 40.34 | 456 / 459 |
prostate | 100% | 750.76 | 245 / 245 | 99% | 16.71 | 498 / 502 |
adrenal gland | 100% | 911.97 | 258 / 258 | 99% | 20.20 | 228 / 230 |
intestine | 100% | 854.79 | 966 / 966 | 99% | 26.95 | 522 / 527 |
kidney | 100% | 648.70 | 89 / 89 | 99% | 15.46 | 889 / 901 |
thymus | 100% | 559.86 | 651 / 653 | 99% | 17.13 | 597 / 605 |
skin | 100% | 1300.89 | 1809 / 1809 | 98% | 23.66 | 464 / 472 |
liver | 98% | 399.58 | 221 / 226 | 91% | 10.92 | 371 / 406 |
pancreas | 80% | 219.38 | 264 / 328 | 99% | 22.38 | 176 / 178 |
lymph node | 0% | 0 | 0 / 0 | 100% | 31.97 | 29 / 29 |
spleen | 100% | 795.27 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 32.18 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 11.77 | 1 / 1 |
adipose | 100% | 735.01 | 1202 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 494.43 | 1326 / 1335 | 0% | 0 | 0 / 0 |
heart | 94% | 394.59 | 813 / 861 | 0% | 0 | 0 / 0 |
muscle | 91% | 300.91 | 731 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 85% | 9.56 | 68 / 80 |
peripheral blood | 71% | 306.53 | 659 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0000460 | Biological process | maturation of 5.8S rRNA |
GO_0005730 | Cellular component | nucleolus |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0000178 | Cellular component | exosome (RNase complex) |
GO_0000176 | Cellular component | nuclear exosome (RNase complex) |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | MPHOSPH6 |
Protein name | M-phase phosphoprotein 6 |
Synonyms | MPP6 hCG_38475 |
Description | FUNCTION: RNA-binding protein that associates with the RNA exosome complex. Involved in the 3'-processing of the 7S pre-RNA to the mature 5.8S rRNA and play a role in recruiting the RNA exosome complex to pre-rRNA; this function may include C1D. . |
Accessions | ENST00000563504.5 ENST00000258169.9 ENST00000569021.1 H3BU96 ENST00000568016.1 Q99547 H3BNK8 H3BNT4 ENST00000563100.5 H3BSB3 |