Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 18 studies | 57% ± 19% | |
peripheral blood | 14 studies | 26% ± 7% | |
intestine | 13 studies | 42% ± 19% | |
kidney | 9 studies | 60% ± 19% | |
liver | 8 studies | 37% ± 18% | |
eye | 7 studies | 37% ± 14% | |
brain | 6 studies | 35% ± 16% | |
heart | 6 studies | 30% ± 15% | |
pancreas | 5 studies | 57% ± 16% | |
bone marrow | 5 studies | 26% ± 6% | |
uterus | 5 studies | 69% ± 11% | |
esophagus | 5 studies | 64% ± 28% | |
prostate | 5 studies | 64% ± 27% | |
lymph node | 5 studies | 47% ± 25% | |
placenta | 4 studies | 45% ± 6% | |
skin | 4 studies | 66% ± 19% | |
breast | 4 studies | 51% ± 8% | |
ovary | 3 studies | 41% ± 20% | |
adipose | 3 studies | 27% ± 3% | |
adrenal gland | 3 studies | 40% ± 2% | |
thymus | 3 studies | 62% ± 18% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
uterus | 100% | 74370.89 | 170 / 170 | 99% | 4013.92 | 455 / 459 |
skin | 99% | 57475.32 | 1795 / 1809 | 98% | 1192.86 | 461 / 472 |
kidney | 98% | 37331.69 | 87 / 89 | 97% | 1264.80 | 872 / 901 |
esophagus | 100% | 113561.42 | 1443 / 1445 | 91% | 2829.29 | 167 / 183 |
bladder | 100% | 63455.48 | 21 / 21 | 91% | 2085.97 | 459 / 504 |
thymus | 87% | 26485.43 | 567 / 653 | 98% | 999.89 | 592 / 605 |
prostate | 96% | 40853.57 | 234 / 245 | 84% | 773.48 | 421 / 502 |
adrenal gland | 90% | 30748.34 | 233 / 258 | 86% | 981.99 | 198 / 230 |
lung | 80% | 32368.39 | 462 / 578 | 92% | 1472.84 | 1063 / 1155 |
breast | 85% | 21335.78 | 390 / 459 | 85% | 1184.22 | 947 / 1118 |
ovary | 64% | 25263.69 | 115 / 180 | 100% | 2337.52 | 429 / 430 |
intestine | 78% | 47743.27 | 758 / 966 | 79% | 762.78 | 418 / 527 |
pancreas | 42% | 13527.85 | 139 / 328 | 95% | 1334.99 | 169 / 178 |
stomach | 50% | 22684.10 | 180 / 359 | 81% | 779.70 | 231 / 286 |
liver | 39% | 9251.48 | 89 / 226 | 88% | 941.78 | 359 / 406 |
eye | 0% | 0 | 0 / 0 | 100% | 1348.14 | 80 / 80 |
tonsil | 0% | 0 | 0 / 0 | 100% | 3844.86 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 729.04 | 1 / 1 |
blood vessel | 100% | 115712.59 | 1333 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 77283.64 | 797 / 803 | 0% | 0 | 0 / 0 |
heart | 96% | 66015.02 | 829 / 861 | 0% | 0 | 0 / 0 |
adipose | 94% | 29709.89 | 1128 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 72% | 463.39 | 21 / 29 |
brain | 26% | 8781.31 | 695 / 2642 | 41% | 297.78 | 291 / 705 |
peripheral blood | 21% | 5914.96 | 191 / 929 | 0% | 0 | 0 / 0 |
spleen | 19% | 4569.65 | 45 / 241 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006986 | Biological process | response to unfolded protein |
GO_0009408 | Biological process | response to heat |
GO_0006469 | Biological process | negative regulation of protein kinase activity |
GO_0061077 | Biological process | chaperone-mediated protein folding |
GO_0070527 | Biological process | platelet aggregation |
GO_0043536 | Biological process | positive regulation of blood vessel endothelial cell migration |
GO_0045766 | Biological process | positive regulation of angiogenesis |
GO_0009615 | Biological process | response to virus |
GO_1902176 | Biological process | negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway |
GO_0001932 | Biological process | regulation of protein phosphorylation |
GO_0032731 | Biological process | positive regulation of interleukin-1 beta production |
GO_0035556 | Biological process | intracellular signal transduction |
GO_0043066 | Biological process | negative regulation of apoptotic process |
GO_0006446 | Biological process | regulation of translational initiation |
GO_0010506 | Biological process | regulation of autophagy |
GO_2001028 | Biological process | positive regulation of endothelial cell chemotaxis |
GO_0042026 | Biological process | protein refolding |
GO_0048010 | Biological process | vascular endothelial growth factor receptor signaling pathway |
GO_0043122 | Biological process | regulation of canonical NF-kappaB signal transduction |
GO_0035924 | Biological process | cellular response to vascular endothelial growth factor stimulus |
GO_0032760 | Biological process | positive regulation of tumor necrosis factor production |
GO_0099641 | Biological process | anterograde axonal protein transport |
GO_0000502 | Cellular component | proteasome complex |
GO_0005615 | Cellular component | extracellular space |
GO_0005856 | Cellular component | cytoskeleton |
GO_0030018 | Cellular component | Z disc |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005925 | Cellular component | focal adhesion |
GO_0001533 | Cellular component | cornified envelope |
GO_0005819 | Cellular component | spindle |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_1904115 | Cellular component | axon cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0005080 | Molecular function | protein kinase C binding |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0043130 | Molecular function | ubiquitin binding |
GO_0044183 | Molecular function | protein folding chaperone |
GO_0019901 | Molecular function | protein kinase binding |
GO_0042802 | Molecular function | identical protein binding |
GO_0051082 | Molecular function | unfolded protein binding |
GO_0061629 | Molecular function | RNA polymerase II-specific DNA-binding transcription factor binding |
GO_0003723 | Molecular function | RNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0008426 | Molecular function | protein kinase C inhibitor activity |
Gene name | HSPB1 |
Protein name | Putative heat shock protein family B member 1 isoform Heat shock protein family B (small) member 1 Heat shock protein beta-1 (HspB1) (28 kDa heat shock protein) (Estrogen-regulated 24 kDa protein) (Heat shock 27 kDa protein) (HSP 27) (Stress-responsive protein 27) (SRP27) Heat shock protein beta-1 (Heat shock 27 kDa protein) Heat shock protein family B (small) member 1 (Putative heat shock protein family B member 1 isoform) |
Synonyms | HSP27 HSP28 |
Description | FUNCTION: Small heat shock protein which functions as a molecular chaperone probably maintaining denatured proteins in a folding-competent state . Plays a role in stress resistance and actin organization . Through its molecular chaperone activity may regulate numerous biological processes including the phosphorylation and the axonal transport of neurofilament proteins . . |
Accessions | ENST00000675538.1 ENST00000674547.1 ENST00000674650.1 A0A6Q8PH65 A0A6Q8PGK1 ENST00000676231.1 A0A6Q8PGY2 ENST00000675134.1 A0A6Q8PF43 C9J3N8 ENST00000248553.7 A0A6Q8PFE7 A0A8E9ZT92 ENST00000675906.1 ENST00000674965.1 A0A8E9ZUD7 ENST00000674638.1 ENST00000675226.1 ENST00000429938.1 P04792 A0A6Q8PHJ6 A0A6Q8PFK8 A0A6Q8PHA6 |