Name | Number of supported studies | Average coverage | |
---|---|---|---|
classical monocyte | 12 studies | 26% ± 6% | |
non-classical monocyte | 8 studies | 21% ± 7% | |
macrophage | 7 studies | 19% ± 3% | |
conventional dendritic cell | 6 studies | 28% ± 11% | |
dendritic cell | 5 studies | 28% ± 14% | |
monocyte | 5 studies | 22% ± 6% | |
microglial cell | 4 studies | 22% ± 6% | |
B cell | 4 studies | 18% ± 1% | |
common myeloid progenitor | 3 studies | 28% ± 13% | |
naive B cell | 3 studies | 18% ± 2% | |
hematopoietic stem cell | 3 studies | 19% ± 2% | |
plasmacytoid dendritic cell | 3 studies | 22% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2750.88 | 1445 / 1445 | 100% | 28.95 | 183 / 183 |
ovary | 100% | 4040.46 | 180 / 180 | 100% | 53.19 | 430 / 430 |
thymus | 100% | 3282.84 | 653 / 653 | 100% | 34.44 | 605 / 605 |
uterus | 100% | 4120.22 | 170 / 170 | 100% | 50.93 | 459 / 459 |
skin | 100% | 2975.61 | 1809 / 1809 | 100% | 54.53 | 471 / 472 |
liver | 100% | 1910.11 | 226 / 226 | 100% | 30.16 | 405 / 406 |
brain | 100% | 2357.24 | 2634 / 2642 | 100% | 48.06 | 705 / 705 |
adrenal gland | 100% | 2910.45 | 258 / 258 | 100% | 36.94 | 229 / 230 |
kidney | 100% | 2826.82 | 89 / 89 | 99% | 30.15 | 896 / 901 |
pancreas | 100% | 2080.37 | 328 / 328 | 99% | 34.75 | 177 / 178 |
intestine | 100% | 3061.52 | 966 / 966 | 99% | 45.90 | 524 / 527 |
prostate | 100% | 4104.78 | 245 / 245 | 99% | 37.36 | 499 / 502 |
lung | 100% | 2832.70 | 578 / 578 | 99% | 33.38 | 1148 / 1155 |
stomach | 100% | 2202.36 | 359 / 359 | 99% | 37.29 | 284 / 286 |
bladder | 100% | 3612.00 | 21 / 21 | 99% | 46.95 | 500 / 504 |
breast | 100% | 3117.78 | 459 / 459 | 99% | 33.64 | 1108 / 1118 |
adipose | 100% | 2979.78 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 59.87 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 76.85 | 29 / 29 |
spleen | 100% | 5334.51 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 40.40 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 40.33 | 1 / 1 |
muscle | 100% | 2099.36 | 802 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2077.09 | 1333 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 1596.67 | 851 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 96% | 1859.31 | 892 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006400 | Biological process | tRNA modification |
GO_0002940 | Biological process | tRNA N2-guanine methylation |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0160104 | Molecular function | tRNA (guanine(26)-N2)-dimethyltransferase activity |
GO_0160102 | Molecular function | tRNA (guanine(10)-N2)-methyltransferase activity |
GO_0000049 | Molecular function | tRNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | TRMT1 |
Protein name | tRNA (guanine(26)-N(2))-dimethyltransferase (EC 2.1.1.216) (tRNA 2,2-dimethylguanosine-26 methyltransferase) (tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA(m(2,2)G26)dimethyltransferase) tRNA (guanine(26)-N(2))-dimethyltransferase (EC 2.1.1.216) tRNA methyltransferase 1 |
Synonyms | |
Description | FUNCTION: Dimethylates a single guanine residue at position 26 of most tRNAs using S-adenosyl-L-methionine as donor of the methyl groups. |
Accessions | Q9NXH9 K7ERR5 ENST00000221504.12 [Q9NXH9-2] ENST00000357720.9 [Q9NXH9-1] ENST00000587487.5 K7EQY6 ENST00000586224.5 ENST00000437766.5 [Q9NXH9-1] K7EMZ2 K7EJX9 K7EQQ8 ENST00000587633.1 ENST00000591717.5 ENST00000592062.5 [Q9NXH9-1] ENST00000588229.1 ENST00000592814.5 K7EQU7 ENST00000588746.5 K7ENI9 |